Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.21■□□□□ 0.83
CNTNAP3BQ96NU0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 AL353708.3-201ENST00000610272 989 ntBASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP3BQ96NU0 AC012676.1-201ENST00000574705 1949 ntBASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 AC026396.1-201ENST00000419388 421 ntBASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 KRT126P-201ENST00000549467 1181 ntBASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 HLA-B-256ENST00000639848 1089 ntBASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP3BQ96NU0 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNTNAP3BQ96NU0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 NTF6B-201ENST00000591913 560 ntBASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNTNAP3BQ96NU0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 AC087388.1-201ENST00000571370 1112 ntBASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 AC005363.2-201ENST00000618631 242 ntBASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.16■□□□□ 0.82
CNTNAP3BQ96NU0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 AC005521.1-201ENST00000393351 872 ntBASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.15■□□□□ 0.82
CNTNAP3BQ96NU0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms