Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.65■■□□□ 1.06
IFT43Q96FT9 BX005040.4-201ENST00000637145 1518 ntBASIC21.65■■□□□ 1.06
IFT43Q96FT9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IFT43Q96FT9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IFT43Q96FT9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
IFT43Q96FT9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.64■■□□□ 1.05
IFT43Q96FT9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.64■■□□□ 1.05
IFT43Q96FT9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.64■■□□□ 1.05
IFT43Q96FT9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.64■■□□□ 1.05
IFT43Q96FT9 AC092437.1-201ENST00000624794 1048 ntBASIC21.64■■□□□ 1.05
IFT43Q96FT9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.64■■□□□ 1.05
IFT43Q96FT9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFT43Q96FT9 AC009237.3-201ENST00000393279 1427 ntBASIC21.63■■□□□ 1.05
IFT43Q96FT9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFT43Q96FT9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.63■■□□□ 1.05
IFT43Q96FT9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IFT43Q96FT9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFT43Q96FT9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
IFT43Q96FT9 AC092667.1-201ENST00000434301 2586 ntBASIC21.63■■□□□ 1.05
IFT43Q96FT9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 AC090192.1-201ENST00000517740 490 ntBASIC21.62■■□□□ 1.05
IFT43Q96FT9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.62■■□□□ 1.05
IFT43Q96FT9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFT43Q96FT9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFT43Q96FT9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
IFT43Q96FT9 AP006587.3-201ENST00000525742 1516 ntBASIC21.6■■□□□ 1.05
IFT43Q96FT9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IFT43Q96FT9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 TPRG1LP1-201ENST00000598702 760 ntBASIC21.6■■□□□ 1.05
IFT43Q96FT9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IFT43Q96FT9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IFT43Q96FT9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 AC026471.6-201ENST00000622954 1905 ntBASIC21.6■■□□□ 1.05
IFT43Q96FT9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.6■■□□□ 1.05
IFT43Q96FT9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
IFT43Q96FT9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IFT43Q96FT9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
IFT43Q96FT9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IFT43Q96FT9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms