Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SCAMP4Q969E2 AC061975.6-201ENST00000579045 1553 ntBASIC20.98■□□□□ 0.95
SCAMP4Q969E2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.98■□□□□ 0.95
SCAMP4Q969E2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 KRT18P11-201ENST00000435214 1283 ntBASIC20.97■□□□□ 0.95
SCAMP4Q969E2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 AC008175.2-201ENST00000612840 297 ntBASIC20.97■□□□□ 0.95
SCAMP4Q969E2 AC011767.1-201ENST00000617410 1153 ntBASIC20.97■□□□□ 0.95
SCAMP4Q969E2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCAMP4Q969E2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 KRT18P20-201ENST00000548986 1279 ntBASIC20.96■□□□□ 0.95
SCAMP4Q969E2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 BID-214ENST00000617586 542 ntTSL 5 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCAMP4Q969E2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
SCAMP4Q969E2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 MFSD11-216ENST00000590393 1141 ntBASIC20.95■□□□□ 0.94
SCAMP4Q969E2 AC080038.1-201ENST00000611274 1154 ntBASIC20.95■□□□□ 0.94
SCAMP4Q969E2 MYCNOS-205ENST00000641950 531 ntBASIC20.95■□□□□ 0.94
SCAMP4Q969E2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 LINC00565-201ENST00000562710 2331 ntBASIC20.95■□□□□ 0.94
SCAMP4Q969E2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
SCAMP4Q969E2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.94■□□□□ 0.94
SCAMP4Q969E2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.94■□□□□ 0.94
SCAMP4Q969E2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCAMP4Q969E2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SCAMP4Q969E2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms