Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.35■■□□□ 1.33
PSPC1Q8WXF1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.35■■□□□ 1.33
PSPC1Q8WXF1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PSPC1Q8WXF1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PSPC1Q8WXF1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 AC010542.4-201ENST00000563151 1910 ntBASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 DUX4L16-201ENST00000555130 1264 ntBASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 AC120498.10-201ENST00000621827 505 ntBASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PSPC1Q8WXF1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PSPC1Q8WXF1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PSPC1Q8WXF1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
PSPC1Q8WXF1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
PSPC1Q8WXF1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PSPC1Q8WXF1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PSPC1Q8WXF1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 LINC00565-201ENST00000562710 2331 ntBASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 AC010536.3-201ENST00000620306 533 ntBASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 AC231657.2-201ENST00000624556 255 ntBASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.32■■□□□ 1.32
PSPC1Q8WXF1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSPC1Q8WXF1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 CROCCP5-201ENST00000436658 830 ntBASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 AC006970.2-201ENST00000450065 779 ntBASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSPC1Q8WXF1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 ID1-201ENST00000376105 1233 ntBASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 C11orf96-202ENST00000528572 1834 ntBASIC23.29■■□□□ 1.32
PSPC1Q8WXF1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 KRT16P2-201ENST00000414673 1423 ntBASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 AC007322.1-201ENST00000426983 750 ntBASIC23.28■■□□□ 1.32
PSPC1Q8WXF1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms