Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.73■□□□□ 0.75
CT55Q8WUE5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CT55Q8WUE5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CT55Q8WUE5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 AC083880.1-201ENST00000608266 535 ntBASIC19.72■□□□□ 0.75
CT55Q8WUE5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.72■□□□□ 0.75
CT55Q8WUE5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CT55Q8WUE5 AC080038.3-201ENST00000623346 1952 ntBASIC19.72■□□□□ 0.75
CT55Q8WUE5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CT55Q8WUE5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.71■□□□□ 0.75
CT55Q8WUE5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CT55Q8WUE5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CT55Q8WUE5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CT55Q8WUE5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 AC097658.1-201ENST00000475555 843 ntBASIC19.7■□□□□ 0.74
CT55Q8WUE5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 MYC-209ENST00000641252 345 ntBASIC19.7■□□□□ 0.74
CT55Q8WUE5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CT55Q8WUE5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CT55Q8WUE5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 C1orf229-201ENST00000623686 2258 ntBASIC19.69■□□□□ 0.74
CT55Q8WUE5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 AC127496.7-201ENST00000625110 1798 ntBASIC19.69■□□□□ 0.74
CT55Q8WUE5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.69■□□□□ 0.74
CT55Q8WUE5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CT55Q8WUE5 AC026471.6-201ENST00000622954 1905 ntBASIC19.68■□□□□ 0.74
CT55Q8WUE5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CT55Q8WUE5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CT55Q8WUE5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CT55Q8WUE5 KRT18P29-201ENST00000397031 1267 ntBASIC19.68■□□□□ 0.74
CT55Q8WUE5 DUSP5P2-201ENST00000426873 1033 ntBASIC19.68■□□□□ 0.74
CT55Q8WUE5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 AC091874.3-201ENST00000512672 1195 ntBASIC19.68■□□□□ 0.74
CT55Q8WUE5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.68■□□□□ 0.74
CT55Q8WUE5 AC008687.6-201ENST00000596318 630 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms