Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AC107956.1-201ENST00000494359 873 ntBASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.41□□□□□ -0.1
ALMS1Q8TCU4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 AC133561.5-201ENST00000635547 218 ntBASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 AL355075.4-201ENST00000554988 638 ntBASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 MIR4785-201ENST00000585005 73 ntBASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 RN7SL471P-201ENST00000580476 299 ntBASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ALMS1Q8TCU4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
ALMS1Q8TCU4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
ALMS1Q8TCU4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
ALMS1Q8TCU4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 AL139125.2-201ENST00000623134 1869 ntBASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 AC100791.3-201ENST00000617619 330 ntBASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 POU5F1P4-201ENST00000413175 1085 ntBASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 AL589743.5-201ENST00000616611 1050 ntBASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ALMS1Q8TCU4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 C2orf69P4-201ENST00000565394 541 ntBASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 AC092368.3-202ENST00000574180 1591 ntBASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ALMS1Q8TCU4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AL353708.3-201ENST00000610272 989 ntBASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AC142381.3-201ENST00000568208 1670 ntBASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 LINC00526-201ENST00000581067 1875 ntBASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ALMS1Q8TCU4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms