Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 TSPY9P-201ENST00000440215 945 ntBASIC20.36■□□□□ 0.85
HIPK4Q8NE63 TSPY11P-201ENST00000442607 1045 ntBASIC20.36■□□□□ 0.85
HIPK4Q8NE63 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 AFG3L1P-217ENST00000557444 2447 ntBASIC20.36■□□□□ 0.85
HIPK4Q8NE63 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIPK4Q8NE63 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 RARRES2P1-201ENST00000474487 481 ntBASIC20.35■□□□□ 0.85
HIPK4Q8NE63 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIPK4Q8NE63 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 AL499627.2-201ENST00000606283 725 ntBASIC20.34■□□□□ 0.85
HIPK4Q8NE63 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
HIPK4Q8NE63 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIPK4Q8NE63 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
HIPK4Q8NE63 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HIPK4Q8NE63 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms