Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 MIR5787-201ENST00000611784 55 ntBASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIMC1Q8NDZ2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 Z98882.1-201ENST00000622160 2253 ntBASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 YBX1P1-201ENST00000445822 960 ntBASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIMC1Q8NDZ2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIMC1Q8NDZ2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 CCDC92B-201ENST00000575506 885 ntBASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 AC073130.3-201ENST00000624389 2278 ntBASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 AF106564.1-201ENST00000607058 2553 ntBASIC19.79■□□□□ 0.76
SIMC1Q8NDZ2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 TERF1P2-201ENST00000583350 1212 ntBASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 LINC02228-203ENST00000641970 1355 ntBASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIMC1Q8NDZ2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms