Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNRF1Q8ND25 AC026310.3-201ENST00000625186 2373 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 AC026271.2-201ENST00000428091 497 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L2-201ENST00000561772 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L6-201ENST00000626483 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L1-201ENST00000627662 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L8-201ENST00000629013 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L3-201ENST00000630187 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L7-201ENST00000630678 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 DUX4L5-201ENST00000630834 1275 ntBASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNRF1Q8ND25 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 EEF1DP3-203ENST00000566025 782 ntBASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 AC053503.5-201ENST00000601508 636 ntBASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNRF1Q8ND25 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 AC034268.1-201ENST00000441047 882 ntBASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 CLDN5-201ENST00000403084 2357 ntBASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZNRF1Q8ND25 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 MIR935-201ENST00000401179 91 ntBASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNRF1Q8ND25 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
ZNRF1Q8ND25 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms