Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 AC091305.1-201ENST00000479476 895 ntBASIC20.56■□□□□ 0.88
CPSF7Q8N684 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF7Q8N684 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CPSF7Q8N684 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CPSF7Q8N684 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF7Q8N684 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 AC008764.7-201ENST00000593779 1081 ntBASIC20.54■□□□□ 0.88
CPSF7Q8N684 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CPSF7Q8N684 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF7Q8N684 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 MIR3181-201ENST00000578512 73 ntBASIC20.53■□□□□ 0.88
CPSF7Q8N684 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 AC136469.2-201ENST00000623944 1028 ntBASIC20.53■□□□□ 0.88
CPSF7Q8N684 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF7Q8N684 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF7Q8N684 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 AC027682.1-201ENST00000562846 899 ntBASIC20.52■□□□□ 0.88
CPSF7Q8N684 RARRES2P6-201ENST00000567333 442 ntBASIC20.52■□□□□ 0.88
CPSF7Q8N684 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CPSF7Q8N684 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF7Q8N684 AC133637.1-201ENST00000624115 1537 ntBASIC20.52■□□□□ 0.87
CPSF7Q8N684 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms