Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC33.21■■■□□ 2.91
VPS8Q8N3P4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 MDK-213ENST00000617138 635 ntTSL 2 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
VPS8Q8N3P4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
VPS8Q8N3P4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
VPS8Q8N3P4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC33.2■■■□□ 2.9
VPS8Q8N3P4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC33.2■■■□□ 2.9
VPS8Q8N3P4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC33.19■■■□□ 2.9
VPS8Q8N3P4 AC243732.1-201ENST00000612648 864 ntBASIC33.19■■■□□ 2.9
VPS8Q8N3P4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
VPS8Q8N3P4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC33.18■■■□□ 2.9
VPS8Q8N3P4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
VPS8Q8N3P4 CYP2T1P-201ENST00000432607 1285 ntBASIC33.18■■■□□ 2.9
VPS8Q8N3P4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC33.18■■■□□ 2.9
VPS8Q8N3P4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
VPS8Q8N3P4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 PPP1R14BP3-201ENST00000509033 445 ntBASIC33.17■■■□□ 2.9
VPS8Q8N3P4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
VPS8Q8N3P4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 AC120498.10-201ENST00000621827 505 ntBASIC33.16■■■□□ 2.9
VPS8Q8N3P4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
VPS8Q8N3P4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 TERF1P5-201ENST00000477545 1207 ntBASIC33.15■■■□□ 2.9
VPS8Q8N3P4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC33.15■■■□□ 2.9
VPS8Q8N3P4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
VPS8Q8N3P4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 GUSBP6-202ENST00000438529 1198 ntBASIC33.13■■■□□ 2.89
VPS8Q8N3P4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
VPS8Q8N3P4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
VPS8Q8N3P4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC33.12■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms