Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 AC091305.1-201ENST00000479476 895 ntBASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 AC126544.1-201ENST00000580842 1059 ntBASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF111Q6ZNA4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 AL136967.2-201ENST00000623968 743 ntBASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF111Q6ZNA4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 RASA4CP-201ENST00000424092 1398 ntBASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 AC068587.7-201ENST00000641602 218 ntBASIC20.4■□□□□ 0.86
RNF111Q6ZNA4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF111Q6ZNA4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF111Q6ZNA4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 CA15P2-201ENST00000611168 834 ntBASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 AC087239.1-201ENST00000622671 572 ntBASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 AL031602.1-201ENST00000633169 911 ntBASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF111Q6ZNA4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms