Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCRAQ6ISU1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 AC087499.1-201ENST00000418141 1075 ntBASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 SOX15-203ENST00000570788 1093 ntBASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 LINC01960-201ENST00000563759 1884 ntBASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 AC142381.3-201ENST00000568208 1670 ntBASIC21.98■■□□□ 1.11
PTCRAQ6ISU1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCRAQ6ISU1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCRAQ6ISU1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.95■■□□□ 1.11
PTCRAQ6ISU1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 AL589743.5-201ENST00000616611 1050 ntBASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCRAQ6ISU1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCRAQ6ISU1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 LINC00526-201ENST00000581067 1875 ntBASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 AC100791.3-201ENST00000617619 330 ntBASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 AC097493.4-201ENST00000641197 219 ntBASIC21.93■■□□□ 1.1
PTCRAQ6ISU1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.92■■□□□ 1.1
PTCRAQ6ISU1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms