Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 AL671883.3-201ENST00000603274 991 ntBASIC11.77□□□□□ -0.53
UBR4Q5T4S7 KRT17P1-201ENST00000399211 1546 ntBASIC11.77□□□□□ -0.53
UBR4Q5T4S7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBR4Q5T4S7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AC091076.1-201ENST00000610741 619 ntBASIC11.76□□□□□ -0.53
UBR4Q5T4S7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AC009237.3-201ENST00000393279 1427 ntBASIC11.76□□□□□ -0.53
UBR4Q5T4S7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AL031133.1-201ENST00000406807 723 ntBASIC11.76□□□□□ -0.53
UBR4Q5T4S7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AL034346.1-201ENST00000568244 1277 ntBASIC11.76□□□□□ -0.53
UBR4Q5T4S7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AP000525.1-201ENST00000608286 694 ntBASIC11.76□□□□□ -0.53
UBR4Q5T4S7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC11.76□□□□□ -0.53
UBR4Q5T4S7 AC124016.1-201ENST00000609552 612 ntBASIC11.75□□□□□ -0.53
UBR4Q5T4S7 MYC-208ENST00000641036 567 ntBASIC11.75□□□□□ -0.53
UBR4Q5T4S7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AC093458.2-201ENST00000623150 629 ntBASIC11.75□□□□□ -0.53
UBR4Q5T4S7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
UBR4Q5T4S7 LINC01529-204ENST00000636474 1715 ntBASIC11.75□□□□□ -0.53
UBR4Q5T4S7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AC239809.2-201ENST00000415381 517 ntBASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.74□□□□□ -0.53
UBR4Q5T4S7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 SLC6A10P-202ENST00000431994 2058 ntBASIC11.74□□□□□ -0.53
UBR4Q5T4S7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 POM121L13P-201ENST00000422362 380 ntBASIC11.74□□□□□ -0.53
UBR4Q5T4S7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UBR4Q5T4S7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 AC060766.5-201ENST00000590539 871 ntBASIC11.73□□□□□ -0.53
UBR4Q5T4S7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.73□□□□□ -0.53
UBR4Q5T4S7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBR4Q5T4S7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms