Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRK2Q5S007 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRK2Q5S007 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRK2Q5S007 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRK2Q5S007 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRRK2Q5S007 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
LRRK2Q5S007 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRK2Q5S007 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 AL121749.1-202ENST00000609313 2153 ntBASIC18.54■□□□□ 0.56
LRRK2Q5S007 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRK2Q5S007 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.54■□□□□ 0.56
LRRK2Q5S007 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRK2Q5S007 RARRES2P10-201ENST00000564312 460 ntBASIC18.54■□□□□ 0.56
LRRK2Q5S007 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRK2Q5S007 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRK2Q5S007 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRK2Q5S007 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRK2Q5S007 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 NTF6B-201ENST00000591913 560 ntBASIC18.53■□□□□ 0.56
LRRK2Q5S007 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRK2Q5S007 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
LRRK2Q5S007 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRK2Q5S007 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRK2Q5S007 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LRRK2Q5S007 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRK2Q5S007 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.52■□□□□ 0.55
LRRK2Q5S007 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.52■□□□□ 0.55
LRRK2Q5S007 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AC092368.3-202ENST00000574180 1591 ntBASIC18.51■□□□□ 0.55
LRRK2Q5S007 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AP004607.7-201ENST00000527152 1677 ntBASIC18.51■□□□□ 0.55
LRRK2Q5S007 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AC113347.1-201ENST00000413321 391 ntBASIC18.51■□□□□ 0.55
LRRK2Q5S007 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRK2Q5S007 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRK2Q5S007 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 UPK3BP1-201ENST00000428678 509 ntBASIC18.5■□□□□ 0.55
LRRK2Q5S007 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.5■□□□□ 0.55
LRRK2Q5S007 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.5■□□□□ 0.55
LRRK2Q5S007 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 AC120498.10-201ENST00000621827 505 ntBASIC18.5■□□□□ 0.55
LRRK2Q5S007 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LRRK2Q5S007 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRK2Q5S007 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms