Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 AC073210.2-201ENST00000430369 194 ntBASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 OR10C1-204ENST00000622521 1039 ntBASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 AC133041.1-202ENST00000642053 222 ntBASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 AC010542.4-201ENST00000563151 1910 ntBASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 MIR4651-201ENST00000582622 73 ntBASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNFT1Q5M7Z0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNFT1Q5M7Z0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 AC069236.1-201ENST00000604339 616 ntBASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 AC008694.1-202ENST00000636953 945 ntBASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNFT1Q5M7Z0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 AL512625.2-201ENST00000417533 625 ntBASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 MIR4758-201ENST00000577688 71 ntBASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 FAM99A-202ENST00000538190 1989 ntBASIC19.02■□□□□ 0.64
RNFT1Q5M7Z0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNFT1Q5M7Z0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
RNFT1Q5M7Z0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 AL591742.1-201ENST00000604433 565 ntBASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 AC243732.1-201ENST00000612648 864 ntBASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 TMEM191A-211ENST00000637163 1067 ntBASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.01■□□□□ 0.63
RNFT1Q5M7Z0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms