Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 POU5F1P4-201ENST00000413175 1085 ntBASIC18.61■□□□□ 0.57
FREM1Q5H8C1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
FREM1Q5H8C1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.61■□□□□ 0.57
FREM1Q5H8C1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 AC061975.6-201ENST00000579045 1553 ntBASIC18.6■□□□□ 0.57
FREM1Q5H8C1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FREM1Q5H8C1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 ID1-201ENST00000376105 1233 ntBASIC18.59■□□□□ 0.57
FREM1Q5H8C1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 CROCCP5-201ENST00000436658 830 ntBASIC18.59■□□□□ 0.57
FREM1Q5H8C1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 AC008175.2-201ENST00000612840 297 ntBASIC18.59■□□□□ 0.57
FREM1Q5H8C1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FREM1Q5H8C1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 AC013268.1-206ENST00000638368 961 ntBASIC18.58■□□□□ 0.57
FREM1Q5H8C1 AC112229.1-201ENST00000639295 961 ntBASIC18.58■□□□□ 0.57
FREM1Q5H8C1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.58■□□□□ 0.57
FREM1Q5H8C1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.58■□□□□ 0.56
FREM1Q5H8C1 AC053503.5-201ENST00000601508 636 ntBASIC18.58■□□□□ 0.56
FREM1Q5H8C1 AL050303.2-201ENST00000619798 666 ntBASIC18.58■□□□□ 0.56
FREM1Q5H8C1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM1Q5H8C1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FREM1Q5H8C1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.57■□□□□ 0.56
FREM1Q5H8C1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FREM1Q5H8C1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms