Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 KRT18P29-201ENST00000397031 1267 ntBASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KRTCAP3Q53RY4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 AC061975.6-201ENST00000579045 1553 ntBASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 AC003102.1-202ENST00000563394 1796 ntBASIC18.91■□□□□ 0.62
KRTCAP3Q53RY4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 AC092053.2-201ENST00000640557 1818 ntBASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 MYC-209ENST00000641252 345 ntBASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRTCAP3Q53RY4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KRTCAP3Q53RY4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 AC091874.3-201ENST00000512672 1195 ntBASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRTCAP3Q53RY4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.88■□□□□ 0.61
KRTCAP3Q53RY4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRTCAP3Q53RY4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRTCAP3Q53RY4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRTCAP3Q53RY4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
KRTCAP3Q53RY4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms