Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.29■■□□□ 1
KHDC1Q4VXA5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KHDC1Q4VXA5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KHDC1Q4VXA5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 AL157384.1-201ENST00000445995 2473 ntBASIC21.28■■□□□ 1
KHDC1Q4VXA5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 AC123595.1-201ENST00000440769 1046 ntBASIC21.28■■□□□ 1
KHDC1Q4VXA5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KHDC1Q4VXA5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.28■■□□□ 1
KHDC1Q4VXA5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 CCDC92B-201ENST00000575506 885 ntBASIC21.27■■□□□ 1
KHDC1Q4VXA5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KHDC1Q4VXA5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
KHDC1Q4VXA5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.27■□□□□ 0.99
KHDC1Q4VXA5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KHDC1Q4VXA5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 LINC02228-203ENST00000641970 1355 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L2-201ENST00000561772 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 TERF1P2-201ENST00000583350 1212 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L6-201ENST00000626483 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L1-201ENST00000627662 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L8-201ENST00000629013 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L3-201ENST00000630187 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L7-201ENST00000630678 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 DUX4L5-201ENST00000630834 1275 ntBASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KHDC1Q4VXA5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 AC005224.4-201ENST00000583262 1652 ntBASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KHDC1Q4VXA5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KHDC1Q4VXA5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms