Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.27■■□□□ 1.48
USH1GQ495M9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 AL109923.1-201ENST00000618799 583 ntBASIC24.27■■□□□ 1.48
USH1GQ495M9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.27■■□□□ 1.48
USH1GQ495M9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.27■■□□□ 1.48
USH1GQ495M9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.27■■□□□ 1.48
USH1GQ495M9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 TERF1P5-201ENST00000477545 1207 ntBASIC24.26■■□□□ 1.47
USH1GQ495M9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.26■■□□□ 1.47
USH1GQ495M9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
USH1GQ495M9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.26■■□□□ 1.47
USH1GQ495M9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USH1GQ495M9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.25■■□□□ 1.47
USH1GQ495M9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
USH1GQ495M9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.25■■□□□ 1.47
USH1GQ495M9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USH1GQ495M9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
USH1GQ495M9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
USH1GQ495M9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
USH1GQ495M9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.24■■□□□ 1.47
USH1GQ495M9 GPX1P1-201ENST00000388829 606 ntBASIC24.24■■□□□ 1.47
USH1GQ495M9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.24■■□□□ 1.47
USH1GQ495M9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
USH1GQ495M9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
USH1GQ495M9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.24■■□□□ 1.47
USH1GQ495M9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.24■■□□□ 1.47
USH1GQ495M9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.24■■□□□ 1.47
USH1GQ495M9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
USH1GQ495M9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 AL355802.2-201ENST00000402069 882 ntBASIC24.23■■□□□ 1.47
USH1GQ495M9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.23■■□□□ 1.47
USH1GQ495M9 AC013268.1-206ENST00000638368 961 ntBASIC24.23■■□□□ 1.47
USH1GQ495M9 AC112229.1-201ENST00000639295 961 ntBASIC24.23■■□□□ 1.47
USH1GQ495M9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.23■■□□□ 1.47
USH1GQ495M9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
USH1GQ495M9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USH1GQ495M9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
USH1GQ495M9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USH1GQ495M9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.22■■□□□ 1.47
USH1GQ495M9 AC083906.2-201ENST00000511578 360 ntBASIC24.22■■□□□ 1.47
USH1GQ495M9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
USH1GQ495M9 AL121832.2-201ENST00000610979 668 ntBASIC24.22■■□□□ 1.47
USH1GQ495M9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.22■■□□□ 1.47
USH1GQ495M9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
USH1GQ495M9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 C11orf96-202ENST00000528572 1834 ntBASIC24.21■■□□□ 1.47
USH1GQ495M9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
USH1GQ495M9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
USH1GQ495M9 KRT16P2-201ENST00000414673 1423 ntBASIC24.21■■□□□ 1.47
USH1GQ495M9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.21■■□□□ 1.47
USH1GQ495M9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.21■■□□□ 1.47
USH1GQ495M9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.21■■□□□ 1.47
USH1GQ495M9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.21■■□□□ 1.47
USH1GQ495M9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.21■■□□□ 1.47
USH1GQ495M9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
USH1GQ495M9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
USH1GQ495M9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
USH1GQ495M9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
USH1GQ495M9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
USH1GQ495M9 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.2■■□□□ 1.46
USH1GQ495M9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.2■■□□□ 1.46
USH1GQ495M9 ECEL1P1-201ENST00000373592 1742 ntBASIC24.2■■□□□ 1.46
USH1GQ495M9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
USH1GQ495M9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.2■■□□□ 1.46
USH1GQ495M9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
USH1GQ495M9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms