Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC142381.4-202ENST00000563973 229 ntBASIC22.6■■□□□ 1.21
CTC1Q2NKJ3 AC016405.3-201ENST00000607710 860 ntBASIC22.6■■□□□ 1.21
CTC1Q2NKJ3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CTC1Q2NKJ3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 BX276092.2-201ENST00000417668 665 ntBASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 AL158047.1-201ENST00000445918 881 ntBASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 AC128676.1-201ENST00000454392 318 ntBASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 AC069236.1-201ENST00000604339 616 ntBASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 AC008694.1-202ENST00000636953 945 ntBASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CTC1Q2NKJ3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 AC006058.3-201ENST00000606217 1069 ntBASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CTC1Q2NKJ3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.58■■□□□ 1.2
CTC1Q2NKJ3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CTC1Q2NKJ3 C1orf229-201ENST00000623686 2258 ntBASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 EEF1DP3-203ENST00000566025 782 ntBASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 LINC00526-201ENST00000581067 1875 ntBASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CTC1Q2NKJ3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 AC091874.3-201ENST00000512672 1195 ntBASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.55■■□□□ 1.2
CTC1Q2NKJ3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CTC1Q2NKJ3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CTC1Q2NKJ3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms