Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 YGL063C-AYGL063C-A 150 nt3.09□□□□□ -1.91
RUP1Q12242 VMA7YGR020C 357 nt3.09□□□□□ -1.91
RUP1Q12242 AGE2YIL044C 897 nt3.09□□□□□ -1.91
RUP1Q12242 SFH1YLR321C 1281 nt3.09□□□□□ -1.91
RUP1Q12242 PEX11YOL147C 711 nt3.09□□□□□ -1.91
RUP1Q12242 RPB8YOR224C 441 nt3.09□□□□□ -1.91
RUP1Q12242 YOR238WYOR238W 912 nt3.09□□□□□ -1.91
RUP1Q12242 SRL1YOR247W 633 nt3.09□□□□□ -1.91
RUP1Q12242 YPL135C-AYPL135C-A 174 nt3.09□□□□□ -1.91
RUP1Q12242 PPT2YPL148C 522 nt3.09□□□□□ -1.91
RUP1Q12242 APD1YBR151W 951 nt3.09□□□□□ -1.91
RUP1Q12242 ATP25YMR098C 1839 nt3.09□□□□□ -1.92
RUP1Q12242 FLO5YHR211W 3228 nt3.09□□□□□ -1.92
RUP1Q12242 MRS2YOR334W 1413 nt3.09□□□□□ -1.92
RUP1Q12242 CIN1YOR349W 3045 nt3.09□□□□□ -1.92
RUP1Q12242 SRC1YML034W 2505 nt3.09□□□□□ -1.92
RUP1Q12242 SET1YHR119W 3243 nt3.08□□□□□ -1.92
RUP1Q12242 RAD5YLR032W 3510 nt3.08□□□□□ -1.92
RUP1Q12242 YDL050CYDL050C 372 nt3.08□□□□□ -1.92
RUP1Q12242 NKP1YDR383C 717 nt3.08□□□□□ -1.92
RUP1Q12242 MAM1YER106W 909 nt3.08□□□□□ -1.92
RUP1Q12242 UBC12YLR306W 567 nt3.08□□□□□ -1.92
RUP1Q12242 ERG2YMR202W 669 nt3.08□□□□□ -1.92
RUP1Q12242 YNL276CYNL276C 396 nt3.08□□□□□ -1.92
RUP1Q12242 YOR097CYOR097C 528 nt3.08□□□□□ -1.92
RUP1Q12242 YOR366WYOR366W 354 nt3.08□□□□□ -1.92
RUP1Q12242 NIP7YPL211W 546 nt3.08□□□□□ -1.92
RUP1Q12242 DIM1YPL266W 957 nt3.08□□□□□ -1.92
RUP1Q12242 DPB3YBR278W 606 nt3.08□□□□□ -1.92
RUP1Q12242 BEM4YPL161C 1902 nt3.08□□□□□ -1.92
RUP1Q12242 SLH1YGR271W 5904 nt3.08□□□□□ -1.92
RUP1Q12242 ITC1YGL133W 3795 nt3.08□□□□□ -1.92
RUP1Q12242 YGR237CYGR237C 2358 nt3.08□□□□□ -1.92
RUP1Q12242 APC5YOR249C 2058 nt3.07□□□□□ -1.92
RUP1Q12242 GUK1YDR454C 564 nt3.07□□□□□ -1.92
RUP1Q12242 SEC4YFL005W 648 nt3.07□□□□□ -1.92
RUP1Q12242 YGL218WYGL218W 651 nt3.07□□□□□ -1.92
RUP1Q12242 YGR073CYGR073C 372 nt3.07□□□□□ -1.92
RUP1Q12242 COX6YHR051W 447 nt3.07□□□□□ -1.92
RUP1Q12242 RSM19YNR037C 276 nt3.07□□□□□ -1.92
RUP1Q12242 THI80YOR143C 960 nt3.07□□□□□ -1.92
RUP1Q12242 YBR090CYBR090C 369 nt3.07□□□□□ -1.92
RUP1Q12242 HRD1YOL013C 1656 nt3.07□□□□□ -1.92
RUP1Q12242 BPT1YLL015W 4680 nt3.06□□□□□ -1.92
RUP1Q12242 YDL242WYDL242W 354 nt3.06□□□□□ -1.92
RUP1Q12242 VBA4YDR119W 2307 nt3.06□□□□□ -1.92
RUP1Q12242 CBS2YDR197W 1170 nt3.06□□□□□ -1.92
RUP1Q12242 PAU10YDR542W 363 nt3.06□□□□□ -1.92
RUP1Q12242 PMR1YGL167C 2853 nt3.06□□□□□ -1.92
RUP1Q12242 PAU11YGL261C 363 nt3.06□□□□□ -1.92
RUP1Q12242 ENP2YGR145W 2124 nt3.06□□□□□ -1.92
RUP1Q12242 SEC28YIL076W 891 nt3.06□□□□□ -1.92
RUP1Q12242 YJL049WYJL049W 1353 nt3.06□□□□□ -1.92
RUP1Q12242 SUI2YJR007W 915 nt3.06□□□□□ -1.92
RUP1Q12242 AIM25YJR100C 984 nt3.06□□□□□ -1.92
RUP1Q12242 PAU4YLR461W 363 nt3.06□□□□□ -1.92
RUP1Q12242 UNG1YML021C 1080 nt3.06□□□□□ -1.92
RUP1Q12242 RPL13BYMR142C 600 nt3.06□□□□□ -1.92
RUP1Q12242 HHF2YNL030W 312 nt3.06□□□□□ -1.92
RUP1Q12242 MIC27YNL100W 705 nt3.06□□□□□ -1.92
RUP1Q12242 VAM10YOR068C 345 nt3.06□□□□□ -1.92
RUP1Q12242 ECM29YHL030W 5607 nt3.06□□□□□ -1.92
RUP1Q12242 FLO1YAR050W 4614 nt3.06□□□□□ -1.92
RUP1Q12242 RRM3YHR031C 2172 nt3.05□□□□□ -1.92
RUP1Q12242 DRS2YAL026C 4068 nt3.05□□□□□ -1.92
RUP1Q12242 STE6YKL209C 3873 nt3.05□□□□□ -1.92
RUP1Q12242 DUN1YDL101C 1542 nt3.05□□□□□ -1.92
RUP1Q12242 COG7YGL005C 840 nt3.05□□□□□ -1.92
RUP1Q12242 RPS23AYGR118W 438 nt3.05□□□□□ -1.92
RUP1Q12242 YLR307C-AYLR307C-A 264 nt3.05□□□□□ -1.92
RUP1Q12242 HUA2YOR284W 732 nt3.05□□□□□ -1.92
RUP1Q12242 YPL107WYPL107W 747 nt3.05□□□□□ -1.92
RUP1Q12242 RPS23BYPR132W 438 nt3.05□□□□□ -1.92
RUP1Q12242 IRC3YDR332W 2070 nt3.04□□□□□ -1.92
RUP1Q12242 CDC40YDR364C 1368 nt3.04□□□□□ -1.92
RUP1Q12242 ERG9YHR190W 1335 nt3.04□□□□□ -1.92
RUP1Q12242 HTB1YDR224C 396 nt3.04□□□□□ -1.92
RUP1Q12242 PEX10YDR265W 1014 nt3.04□□□□□ -1.92
RUP1Q12242 YFL015CYFL015C 495 nt3.04□□□□□ -1.92
RUP1Q12242 YKL065W-AYKL065W-A 222 nt3.04□□□□□ -1.92
RUP1Q12242 YOL106WYOL106W 354 nt3.04□□□□□ -1.92
RUP1Q12242 CUP9YPL177C 921 nt3.04□□□□□ -1.92
RUP1Q12242 ENA2YDR039C 3276 nt3.04□□□□□ -1.92
RUP1Q12242 ENA1YDR040C 3276 nt3.04□□□□□ -1.92
RUP1Q12242 MET10YFR030W 3108 nt3.04□□□□□ -1.92
RUP1Q12242 NOP4YPL043W 2058 nt3.04□□□□□ -1.92
RUP1Q12242 UTP5YDR398W 1932 nt3.03□□□□□ -1.92
RUP1Q12242 ATG13YPR185W 2217 nt3.03□□□□□ -1.92
RUP1Q12242 TVP15YDR100W 432 nt3.03□□□□□ -1.92
RUP1Q12242 DYN2YDR424C 279 nt3.03□□□□□ -1.92
RUP1Q12242 YGL230CYGL230C 444 nt3.03□□□□□ -1.92
RUP1Q12242 THP2YHR167W 786 nt3.03□□□□□ -1.92
RUP1Q12242 IKI1YHR187W 930 nt3.03□□□□□ -1.92
RUP1Q12242 DAL2YIR029W 1032 nt3.03□□□□□ -1.92
RUP1Q12242 YIR040CYIR040C 333 nt3.03□□□□□ -1.92
RUP1Q12242 YJL047C-AYJL047C-A 135 nt3.03□□□□□ -1.92
RUP1Q12242 SDH3YKL141W 597 nt3.03□□□□□ -1.92
RUP1Q12242 YNL184CYNL184C 327 nt3.03□□□□□ -1.92
RUP1Q12242 PFY1YOR122C 381 nt3.03□□□□□ -1.92
RUP1Q12242 TFC1YBR123C 1950 nt3.03□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms