Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.52■□□□□ 0.72
CD47Q08722 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CD47Q08722 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD47Q08722 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD47Q08722 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD47Q08722 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.52■□□□□ 0.72
CD47Q08722 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.52■□□□□ 0.72
CD47Q08722 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD47Q08722 AL512631.2-201ENST00000604634 923 ntBASIC19.52■□□□□ 0.72
CD47Q08722 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD47Q08722 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.52■□□□□ 0.71
CD47Q08722 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CD47Q08722 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD47Q08722 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.51■□□□□ 0.71
CD47Q08722 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD47Q08722 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.51■□□□□ 0.71
CD47Q08722 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD47Q08722 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD47Q08722 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.51■□□□□ 0.71
CD47Q08722 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.51■□□□□ 0.71
CD47Q08722 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CD47Q08722 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.51■□□□□ 0.71
CD47Q08722 AC092171.4-201ENST00000609130 632 ntBASIC19.51■□□□□ 0.71
CD47Q08722 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 AL049796.1-201ENST00000565336 1766 ntBASIC19.51■□□□□ 0.71
CD47Q08722 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD47Q08722 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD47Q08722 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.51■□□□□ 0.71
CD47Q08722 AC133637.1-201ENST00000624115 1537 ntBASIC19.51■□□□□ 0.71
CD47Q08722 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.5■□□□□ 0.71
CD47Q08722 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD47Q08722 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CD47Q08722 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.5■□□□□ 0.71
CD47Q08722 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.5■□□□□ 0.71
CD47Q08722 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD47Q08722 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.5■□□□□ 0.71
CD47Q08722 GABARAPL3-202ENST00000624044 1851 ntBASIC19.5■□□□□ 0.71
CD47Q08722 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.49■□□□□ 0.71
CD47Q08722 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CD47Q08722 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.49■□□□□ 0.71
CD47Q08722 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.49■□□□□ 0.71
CD47Q08722 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.49■□□□□ 0.71
CD47Q08722 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.49■□□□□ 0.71
CD47Q08722 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD47Q08722 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD47Q08722 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD47Q08722 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.48■□□□□ 0.71
CD47Q08722 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CD47Q08722 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.48■□□□□ 0.71
CD47Q08722 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD47Q08722 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.48■□□□□ 0.71
CD47Q08722 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD47Q08722 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
CD47Q08722 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.48■□□□□ 0.71
CD47Q08722 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CD47Q08722 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CD47Q08722 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CD47Q08722 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CD47Q08722 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.48■□□□□ 0.71
CD47Q08722 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.47■□□□□ 0.71
CD47Q08722 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CD47Q08722 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.47■□□□□ 0.71
CD47Q08722 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 AP005212.1-201ENST00000581547 1997 ntBASIC19.47■□□□□ 0.71
CD47Q08722 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.47■□□□□ 0.71
CD47Q08722 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.47■□□□□ 0.71
CD47Q08722 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CD47Q08722 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD47Q08722 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.47■□□□□ 0.71
CD47Q08722 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms