Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ACA1YER045C 1470 nt2.16□□□□□ -2.06
HRD1Q08109 STE24YJR117W 1362 nt2.16□□□□□ -2.06
HRD1Q08109 CAB2YIL083C 1098 nt2.16□□□□□ -2.06
HRD1Q08109 ERG20YJL167W 1059 nt2.16□□□□□ -2.06
HRD1Q08109 EMC2YJR088C 879 nt2.16□□□□□ -2.06
HRD1Q08109 YKL165C-AYKL165C-A 234 nt2.16□□□□□ -2.06
HRD1Q08109 MRPL38YKL170W 417 nt2.16□□□□□ -2.06
HRD1Q08109 MTD1YKR080W 963 nt2.16□□□□□ -2.06
HRD1Q08109 RPS1AYLR441C 768 nt2.16□□□□□ -2.06
HRD1Q08109 RFM1YOR279C 933 nt2.16□□□□□ -2.06
HRD1Q08109 TIM12YBR091C 330 nt2.16□□□□□ -2.06
HRD1Q08109 SWD3YBR175W 948 nt2.16□□□□□ -2.06
HRD1Q08109 RDS2YPL133C 1341 nt2.16□□□□□ -2.06
HRD1Q08109 FAR11YNL127W 2862 nt2.16□□□□□ -2.06
HRD1Q08109 PDR1YGL013C 3207 nt2.15□□□□□ -2.06
HRD1Q08109 PBI1YPL272C 1554 nt2.15□□□□□ -2.06
HRD1Q08109 BNI1YNL271C 5862 nt2.15□□□□□ -2.07
HRD1Q08109 SSN2YDR443C 4263 nt2.15□□□□□ -2.07
HRD1Q08109 YDR193WYDR193W 399 nt2.15□□□□□ -2.07
HRD1Q08109 YDR355CYDR355C 303 nt2.15□□□□□ -2.07
HRD1Q08109 YHR213WYHR213W 597 nt2.15□□□□□ -2.07
HRD1Q08109 YKR070WYKR070W 1059 nt2.15□□□□□ -2.07
HRD1Q08109 YAR062WYAR062W 597 nt2.15□□□□□ -2.07
HRD1Q08109 VMA6YLR447C 1038 nt2.15□□□□□ -2.07
HRD1Q08109 MED11YMR112C 396 nt2.15□□□□□ -2.07
HRD1Q08109 CBP6YBR120C 489 nt2.15□□□□□ -2.07
HRD1Q08109 TRS130YMR218C 3309 nt2.15□□□□□ -2.07
HRD1Q08109 SGS1YMR190C 4344 nt2.15□□□□□ -2.07
HRD1Q08109 SKO1YNL167C 1944 nt2.15□□□□□ -2.07
HRD1Q08109 YNL011CYNL011C 1335 nt2.15□□□□□ -2.07
HRD1Q08109 YIL080WYIL080W 4722 nt2.15□□□□□ -2.07
HRD1Q08109 HAA1YPR008W 2085 nt2.14□□□□□ -2.07
HRD1Q08109 ARP8YOR141C 2646 nt2.14□□□□□ -2.07
HRD1Q08109 PTP3YER075C 2787 nt2.14□□□□□ -2.07
HRD1Q08109 MSS2YDL107W 1056 nt2.14□□□□□ -2.07
HRD1Q08109 HTA1YDR225W 399 nt2.14□□□□□ -2.07
HRD1Q08109 OTU2YHL013C 924 nt2.14□□□□□ -2.07
HRD1Q08109 BAT1YHR208W 1182 nt2.14□□□□□ -2.07
HRD1Q08109 RSM26YJR101W 801 nt2.14□□□□□ -2.07
HRD1Q08109 ERV41YML067C 1059 nt2.14□□□□□ -2.07
HRD1Q08109 RPL25YOL127W 429 nt2.14□□□□□ -2.07
HRD1Q08109 UAF30YOR295W 687 nt2.14□□□□□ -2.07
HRD1Q08109 RPS12YOR369C 432 nt2.14□□□□□ -2.07
HRD1Q08109 SEC16YPL085W 6588 nt2.14□□□□□ -2.07
HRD1Q08109 KHA1YJL094C 2622 nt2.14□□□□□ -2.07
HRD1Q08109 UTP15YMR093W 1542 nt2.13□□□□□ -2.07
HRD1Q08109 YJL181WYJL181W 1836 nt2.13□□□□□ -2.07
HRD1Q08109 MRP10YDL045W-A 288 nt2.13□□□□□ -2.07
HRD1Q08109 SHU2YDR078C 672 nt2.13□□□□□ -2.07
HRD1Q08109 MST27YGL051W 705 nt2.13□□□□□ -2.07
HRD1Q08109 YGR149WYGR149W 1299 nt2.13□□□□□ -2.07
HRD1Q08109 YKL066WYKL066W 444 nt2.13□□□□□ -2.07
HRD1Q08109 MST28YAR033W 705 nt2.13□□□□□ -2.07
HRD1Q08109 RPS29AYLR388W 171 nt2.13□□□□□ -2.07
HRD1Q08109 YPR078CYPR078C 1119 nt2.13□□□□□ -2.07
HRD1Q08109 VPS64YDR200C 1815 nt2.12□□□□□ -2.07
HRD1Q08109 VIP1YLR410W 3441 nt2.12□□□□□ -2.07
HRD1Q08109 FKS3YMR306W 5358 nt2.12□□□□□ -2.07
HRD1Q08109 YHR180W-AYHR180W-A 183 nt2.12□□□□□ -2.07
HRD1Q08109 YMR147WYMR147W 672 nt2.12□□□□□ -2.07
HRD1Q08109 PFK27YOL136C 1194 nt2.12□□□□□ -2.07
HRD1Q08109 YOR263CYOR263C 408 nt2.12□□□□□ -2.07
HRD1Q08109 RRG7YOR305W 729 nt2.12□□□□□ -2.07
HRD1Q08109 SPS4YOR313C 1017 nt2.12□□□□□ -2.07
HRD1Q08109 FRE8YLR047C 2061 nt2.12□□□□□ -2.07
HRD1Q08109 FIR1YER032W 2631 nt2.12□□□□□ -2.07
HRD1Q08109 STH1YIL126W 4080 nt2.11□□□□□ -2.07
HRD1Q08109 VPS13YLL040C 9435 nt2.11□□□□□ -2.07
HRD1Q08109 21S_rRNA21S_rRNA 3296 nt2.11□□□□□ -2.07
HRD1Q08109 ARF1YDL192W 546 nt2.11□□□□□ -2.07
HRD1Q08109 RNR2YJL026W 1200 nt2.11□□□□□ -2.07
HRD1Q08109 MFA2YNL145W 117 nt2.11□□□□□ -2.07
HRD1Q08109 HSP10YOR020C 321 nt2.11□□□□□ -2.07
HRD1Q08109 AIM41YOR215C 558 nt2.11□□□□□ -2.07
HRD1Q08109 PIN3YPR154W 648 nt2.11□□□□□ -2.07
HRD1Q08109 VMA9YCL005W-A 222 nt2.11□□□□□ -2.07
HRD1Q08109 HAP4YKL109W 1665 nt2.11□□□□□ -2.07
HRD1Q08109 PST1YDR055W 1335 nt2.11□□□□□ -2.07
HRD1Q08109 DUN1YDL101C 1542 nt2.11□□□□□ -2.07
HRD1Q08109 AYT1YLL063C 1425 nt2.1□□□□□ -2.07
HRD1Q08109 MUS81YDR386W 1899 nt2.1□□□□□ -2.07
HRD1Q08109 HUL5YGL141W 2733 nt2.1□□□□□ -2.07
HRD1Q08109 RPB9YGL070C 369 nt2.1□□□□□ -2.07
HRD1Q08109 COS1YNL336W 1146 nt2.1□□□□□ -2.07
HRD1Q08109 YNR062CYNR062C 984 nt2.1□□□□□ -2.07
HRD1Q08109 CAF20YOR276W 486 nt2.1□□□□□ -2.07
HRD1Q08109 MRP2YPR166C 348 nt2.1□□□□□ -2.07
HRD1Q08109 EDS1YBR033W 2760 nt2.1□□□□□ -2.07
HRD1Q08109 TPS2YDR074W 2691 nt2.09□□□□□ -2.07
HRD1Q08109 YKR015CYKR015C 1707 nt2.09□□□□□ -2.07
HRD1Q08109 YJL132WYJL132W 2253 nt2.09□□□□□ -2.07
HRD1Q08109 SWA2YDR320C 2007 nt2.09□□□□□ -2.07
HRD1Q08109 YRB1YDR002W 606 nt2.09□□□□□ -2.07
HRD1Q08109 MTM1YGR257C 1101 nt2.09□□□□□ -2.07
HRD1Q08109 DCG1YIR030C 735 nt2.09□□□□□ -2.07
HRD1Q08109 SNX4YJL036W 1272 nt2.09□□□□□ -2.07
HRD1Q08109 COA4YLR218C 453 nt2.09□□□□□ -2.07
HRD1Q08109 PEX17YNL214W 600 nt2.09□□□□□ -2.07
HRD1Q08109 YOL134CYOL134C 390 nt2.09□□□□□ -2.07
HRD1Q08109 NEL1YHR035W 1893 nt2.09□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms