Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
IRX4P78413 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IRX4P78413 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
IRX4P78413 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
IRX4P78413 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.82■■□□□ 1.08
IRX4P78413 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.82■■□□□ 1.08
IRX4P78413 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
IRX4P78413 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IRX4P78413 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
IRX4P78413 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.81■■□□□ 1.08
IRX4P78413 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.81■■□□□ 1.08
IRX4P78413 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
IRX4P78413 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.81■■□□□ 1.08
IRX4P78413 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX4P78413 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX4P78413 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX4P78413 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
IRX4P78413 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX4P78413 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.8■■□□□ 1.08
IRX4P78413 KRT19P1-201ENST00000405746 1186 ntBASIC21.8■■□□□ 1.08
IRX4P78413 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.8■■□□□ 1.08
IRX4P78413 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IRX4P78413 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX4P78413 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX4P78413 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.79■■□□□ 1.08
IRX4P78413 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
IRX4P78413 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.79■■□□□ 1.08
IRX4P78413 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.79■■□□□ 1.08
IRX4P78413 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
IRX4P78413 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
IRX4P78413 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
IRX4P78413 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.78■■□□□ 1.08
IRX4P78413 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.78■■□□□ 1.08
IRX4P78413 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
IRX4P78413 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.78■■□□□ 1.08
IRX4P78413 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.78■■□□□ 1.08
IRX4P78413 AC011767.1-201ENST00000617410 1153 ntBASIC21.78■■□□□ 1.08
IRX4P78413 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
IRX4P78413 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.78■■□□□ 1.08
IRX4P78413 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX4P78413 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX4P78413 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX4P78413 BX005040.4-201ENST00000637145 1518 ntBASIC21.77■■□□□ 1.08
IRX4P78413 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX4P78413 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
IRX4P78413 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
IRX4P78413 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
IRX4P78413 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.77■■□□□ 1.08
IRX4P78413 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.77■■□□□ 1.08
IRX4P78413 LINC01960-201ENST00000563759 1884 ntBASIC21.77■■□□□ 1.08
IRX4P78413 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.77■■□□□ 1.08
IRX4P78413 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.77■■□□□ 1.07
IRX4P78413 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
IRX4P78413 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
IRX4P78413 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.76■■□□□ 1.07
IRX4P78413 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.76■■□□□ 1.07
IRX4P78413 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.76■■□□□ 1.07
IRX4P78413 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.76■■□□□ 1.07
IRX4P78413 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IRX4P78413 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
IRX4P78413 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IRX4P78413 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms