Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SIRPAP78324 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIRPAP78324 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.19■□□□□ 0.66
SIRPAP78324 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.18■□□□□ 0.66
SIRPAP78324 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.18■□□□□ 0.66
SIRPAP78324 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.18■□□□□ 0.66
SIRPAP78324 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.18■□□□□ 0.66
SIRPAP78324 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.18■□□□□ 0.66
SIRPAP78324 AC079089.2-201ENST00000531211 1277 ntBASIC19.18■□□□□ 0.66
SIRPAP78324 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.18■□□□□ 0.66
SIRPAP78324 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
SIRPAP78324 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIRPAP78324 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SIRPAP78324 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SIRPAP78324 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SIRPAP78324 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.17■□□□□ 0.66
SIRPAP78324 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.17■□□□□ 0.66
SIRPAP78324 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SIRPAP78324 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.17■□□□□ 0.66
SIRPAP78324 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SIRPAP78324 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.17■□□□□ 0.66
SIRPAP78324 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.17■□□□□ 0.66
SIRPAP78324 AL137784.2-201ENST00000607332 1000 ntBASIC19.17■□□□□ 0.66
SIRPAP78324 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.17■□□□□ 0.66
SIRPAP78324 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
SIRPAP78324 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIRPAP78324 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SIRPAP78324 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.16■□□□□ 0.66
SIRPAP78324 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SIRPAP78324 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SIRPAP78324 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
SIRPAP78324 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
SIRPAP78324 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIRPAP78324 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.16■□□□□ 0.66
SIRPAP78324 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SIRPAP78324 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SIRPAP78324 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.15■□□□□ 0.66
SIRPAP78324 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SIRPAP78324 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.15■□□□□ 0.66
SIRPAP78324 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.15■□□□□ 0.66
SIRPAP78324 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.15■□□□□ 0.66
SIRPAP78324 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.15■□□□□ 0.66
SIRPAP78324 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SIRPAP78324 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.15■□□□□ 0.66
SIRPAP78324 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.15■□□□□ 0.66
SIRPAP78324 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SIRPAP78324 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIRPAP78324 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SIRPAP78324 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SIRPAP78324 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SIRPAP78324 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 AC079140.4-201ENST00000507448 529 ntBASIC19.14■□□□□ 0.65
SIRPAP78324 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.14■□□□□ 0.65
SIRPAP78324 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.14■□□□□ 0.65
SIRPAP78324 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.14■□□□□ 0.65
SIRPAP78324 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.14■□□□□ 0.65
SIRPAP78324 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
SIRPAP78324 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIRPAP78324 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
SIRPAP78324 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.14■□□□□ 0.65
SIRPAP78324 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms