Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.37□□□□□ -0.43
RPS28P62857 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RPS28P62857 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RPS28P62857 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RPS28P62857 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPS28P62857 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPS28P62857 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RPS28P62857 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RPS28P62857 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPS28P62857 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RPS28P62857 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
RPS28P62857 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 AC244015.2-201ENST00000616358 1861 ntBASIC12.36□□□□□ -0.43
RPS28P62857 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.36□□□□□ -0.43
RPS28P62857 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.36□□□□□ -0.43
RPS28P62857 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RPS28P62857 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RPS28P62857 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC12.36□□□□□ -0.43
RPS28P62857 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.36□□□□□ -0.43
RPS28P62857 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RPS28P62857 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPS28P62857 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPS28P62857 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC12.35□□□□□ -0.43
RPS28P62857 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.35□□□□□ -0.43
RPS28P62857 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RPS28P62857 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.35□□□□□ -0.43
RPS28P62857 AL596257.1-201ENST00000641463 2694 ntBASIC12.35□□□□□ -0.43
RPS28P62857 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPS28P62857 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.35□□□□□ -0.43
RPS28P62857 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.35□□□□□ -0.43
RPS28P62857 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RPS28P62857 AL162727.3-201ENST00000635661 2787 ntBASIC12.35□□□□□ -0.43
RPS28P62857 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.35□□□□□ -0.43
RPS28P62857 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
RPS28P62857 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 AC093503.3-201ENST00000624917 2352 ntBASIC12.34□□□□□ -0.43
RPS28P62857 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
RPS28P62857 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
RPS28P62857 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
RPS28P62857 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms