Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCR4P61073 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.2■□□□□ 0.66
CXCR4P61073 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CXCR4P61073 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 AFG3L1P-217ENST00000557444 2447 ntBASIC19.2■□□□□ 0.66
CXCR4P61073 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CXCR4P61073 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CXCR4P61073 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CXCR4P61073 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.19■□□□□ 0.66
CXCR4P61073 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CXCR4P61073 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
CXCR4P61073 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CXCR4P61073 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CXCR4P61073 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CXCR4P61073 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXCR4P61073 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
CXCR4P61073 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CXCR4P61073 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.18■□□□□ 0.66
CXCR4P61073 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.18■□□□□ 0.66
CXCR4P61073 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CXCR4P61073 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CXCR4P61073 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
CXCR4P61073 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CXCR4P61073 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
CXCR4P61073 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CXCR4P61073 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CXCR4P61073 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.16■□□□□ 0.66
CXCR4P61073 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.16■□□□□ 0.66
CXCR4P61073 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CXCR4P61073 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CXCR4P61073 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CXCR4P61073 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CXCR4P61073 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CXCR4P61073 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 PLK5-205ENST00000642079 1969 ntBASIC19.15■□□□□ 0.66
CXCR4P61073 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.15■□□□□ 0.66
CXCR4P61073 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.15■□□□□ 0.66
CXCR4P61073 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CXCR4P61073 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CXCR4P61073 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CXCR4P61073 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms