Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN20P56880 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN20P56880 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN20P56880 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN20P56880 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN20P56880 AL034346.1-201ENST00000568244 1277 ntBASIC19.29■□□□□ 0.68
CLDN20P56880 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN20P56880 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN20P56880 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 AC055733.4-201ENST00000638462 1354 ntBASIC19.29■□□□□ 0.68
CLDN20P56880 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN20P56880 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN20P56880 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN20P56880 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN20P56880 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN20P56880 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN20P56880 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN20P56880 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN20P56880 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN20P56880 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 NTF6G-201ENST00000591094 616 ntBASIC19.28■□□□□ 0.68
CLDN20P56880 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLDN20P56880 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN20P56880 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN20P56880 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN20P56880 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN20P56880 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN20P56880 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLDN20P56880 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN20P56880 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN20P56880 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN20P56880 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN20P56880 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN20P56880 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN20P56880 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN20P56880 AC079140.4-201ENST00000507448 529 ntBASIC19.27■□□□□ 0.68
CLDN20P56880 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.27■□□□□ 0.68
CLDN20P56880 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN20P56880 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN20P56880 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN20P56880 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN20P56880 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.27■□□□□ 0.67
CLDN20P56880 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN20P56880 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
CLDN20P56880 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN20P56880 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN20P56880 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN20P56880 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLDN20P56880 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN20P56880 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CLDN20P56880 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN20P56880 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN20P56880 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN20P56880 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDN20P56880 KRT18P61-201ENST00000585825 1298 ntBASIC19.26■□□□□ 0.67
CLDN20P56880 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN20P56880 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN20P56880 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN20P56880 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN20P56880 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN20P56880 AP006587.3-201ENST00000525742 1516 ntBASIC19.25■□□□□ 0.67
CLDN20P56880 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN20P56880 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN20P56880 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN20P56880 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 AC104564.3-201ENST00000582367 638 ntBASIC19.25■□□□□ 0.67
CLDN20P56880 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN20P56880 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN20P56880 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN20P56880 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN20P56880 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN20P56880 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN20P56880 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms