Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
WNT3AP56704 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3AP56704 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3AP56704 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
WNT3AP56704 KRT87P-202ENST00000534226 1464 ntBASIC21.32■■□□□ 1
WNT3AP56704 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3AP56704 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.32■■□□□ 1
WNT3AP56704 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
WNT3AP56704 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.32■■□□□ 1
WNT3AP56704 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3AP56704 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
WNT3AP56704 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.31■■□□□ 1
WNT3AP56704 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
WNT3AP56704 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3AP56704 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.31■■□□□ 1
WNT3AP56704 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
WNT3AP56704 AL024507.2-201ENST00000606070 2574 ntBASIC21.31■■□□□ 1
WNT3AP56704 AF106564.1-201ENST00000607058 2553 ntBASIC21.31■■□□□ 1
WNT3AP56704 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3AP56704 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.31■■□□□ 1
WNT3AP56704 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.31■■□□□ 1
WNT3AP56704 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3AP56704 PKD1P6-201ENST00000343738 4769 ntBASIC21.31■■□□□ 1
WNT3AP56704 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.31■■□□□ 1
WNT3AP56704 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 AC005229.4-201ENST00000610085 2198 ntBASIC21.3■■□□□ 1
WNT3AP56704 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.3■■□□□ 1
WNT3AP56704 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
WNT3AP56704 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.3■■□□□ 1
WNT3AP56704 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.3■■□□□ 1
WNT3AP56704 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 KRT18P14-201ENST00000534205 1250 ntBASIC21.3■■□□□ 1
WNT3AP56704 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
WNT3AP56704 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3AP56704 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
WNT3AP56704 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
WNT3AP56704 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
WNT3AP56704 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.29■■□□□ 1
WNT3AP56704 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.29■■□□□ 1
WNT3AP56704 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.29■■□□□ 1
WNT3AP56704 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.29■■□□□ 1
WNT3AP56704 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
WNT3AP56704 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.29■■□□□ 1
WNT3AP56704 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
WNT3AP56704 AC019069.1-201ENST00000610008 1333 ntBASIC21.29■■□□□ 1
WNT3AP56704 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
WNT3AP56704 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.28■■□□□ 1
WNT3AP56704 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.28■■□□□ 1
WNT3AP56704 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.28■■□□□ 1
WNT3AP56704 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
WNT3AP56704 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
WNT3AP56704 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3AP56704 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.27■■□□□ 1
WNT3AP56704 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.27■■□□□ 1
WNT3AP56704 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
WNT3AP56704 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.27■■□□□ 1
WNT3AP56704 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
WNT3AP56704 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3AP56704 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3AP56704 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3AP56704 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
WNT3AP56704 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.26■□□□□ 0.99
WNT3AP56704 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3AP56704 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3AP56704 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
WNT3AP56704 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.26■□□□□ 0.99
WNT3AP56704 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.26■□□□□ 0.99
WNT3AP56704 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.26■□□□□ 0.99
WNT3AP56704 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms