Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 AC243732.1-201ENST00000612648 864 ntBASIC20.35■□□□□ 0.85
EPHA4P54764 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.35■□□□□ 0.85
EPHA4P54764 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 AC068338.2-201ENST00000563278 1430 ntBASIC20.35■□□□□ 0.85
EPHA4P54764 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EPHA4P54764 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.34■□□□□ 0.85
EPHA4P54764 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.34■□□□□ 0.85
EPHA4P54764 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA4P54764 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA4P54764 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
EPHA4P54764 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.34■□□□□ 0.85
EPHA4P54764 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
EPHA4P54764 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.34■□□□□ 0.85
EPHA4P54764 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EPHA4P54764 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA4P54764 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EPHA4P54764 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
EPHA4P54764 CYP2T1P-201ENST00000432607 1285 ntBASIC20.33■□□□□ 0.85
EPHA4P54764 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
EPHA4P54764 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.33■□□□□ 0.85
EPHA4P54764 AL162412.1-201ENST00000567129 965 ntBASIC20.33■□□□□ 0.85
EPHA4P54764 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.33■□□□□ 0.85
EPHA4P54764 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA4P54764 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.33■□□□□ 0.84
EPHA4P54764 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
EPHA4P54764 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA4P54764 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EPHA4P54764 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
EPHA4P54764 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA4P54764 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA4P54764 C9orf163-202ENST00000624034 2573 ntBASIC20.32■□□□□ 0.84
EPHA4P54764 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA4P54764 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA4P54764 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.32■□□□□ 0.84
EPHA4P54764 AC105036.2-201ENST00000569468 176 ntBASIC20.32■□□□□ 0.84
EPHA4P54764 OR10C1-204ENST00000622521 1039 ntBASIC20.32■□□□□ 0.84
EPHA4P54764 RBM17P2-201ENST00000616397 1405 ntBASIC20.32■□□□□ 0.84
EPHA4P54764 AC061975.6-201ENST00000579045 1553 ntBASIC20.32■□□□□ 0.84
EPHA4P54764 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
EPHA4P54764 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.32■□□□□ 0.84
EPHA4P54764 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA4P54764 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPHA4P54764 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHA4P54764 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EPHA4P54764 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHA4P54764 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.31■□□□□ 0.84
EPHA4P54764 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHA4P54764 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.31■□□□□ 0.84
EPHA4P54764 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
EPHA4P54764 AC069236.1-201ENST00000604339 616 ntBASIC20.31■□□□□ 0.84
EPHA4P54764 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHA4P54764 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.31■□□□□ 0.84
EPHA4P54764 AC008694.1-202ENST00000636953 945 ntBASIC20.31■□□□□ 0.84
EPHA4P54764 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA4P54764 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA4P54764 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.31■□□□□ 0.84
EPHA4P54764 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA4P54764 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.31■□□□□ 0.84
EPHA4P54764 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPHA4P54764 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EPHA4P54764 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHA4P54764 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
EPHA4P54764 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EPHA4P54764 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EPHA4P54764 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EPHA4P54764 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPHA4P54764 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
EPHA4P54764 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 FAM99A-202ENST00000538190 1989 ntBASIC20.29■□□□□ 0.84
EPHA4P54764 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPHA4P54764 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.29■□□□□ 0.84
EPHA4P54764 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EPHA4P54764 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms