Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.81■■□□□ 1.72
PDE1AP54750 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.81■■□□□ 1.72
PDE1AP54750 AC079140.4-201ENST00000507448 529 ntBASIC25.81■■□□□ 1.72
PDE1AP54750 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.81■■□□□ 1.72
PDE1AP54750 TERF1P2-201ENST00000583350 1212 ntBASIC25.81■■□□□ 1.72
PDE1AP54750 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.81■■□□□ 1.72
PDE1AP54750 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDE1AP54750 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.81■■□□□ 1.72
PDE1AP54750 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PDE1AP54750 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.81■■□□□ 1.72
PDE1AP54750 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.8■■□□□ 1.72
PDE1AP54750 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDE1AP54750 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
PDE1AP54750 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDE1AP54750 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.8■■□□□ 1.72
PDE1AP54750 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
PDE1AP54750 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.8■■□□□ 1.72
PDE1AP54750 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDE1AP54750 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.8■■□□□ 1.72
PDE1AP54750 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDE1AP54750 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.79■■□□□ 1.72
PDE1AP54750 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.79■■□□□ 1.72
PDE1AP54750 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.79■■□□□ 1.72
PDE1AP54750 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.79■■□□□ 1.72
PDE1AP54750 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDE1AP54750 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PDE1AP54750 KRT87P-202ENST00000534226 1464 ntBASIC25.79■■□□□ 1.72
PDE1AP54750 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC25.78■■□□□ 1.72
PDE1AP54750 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.78■■□□□ 1.72
PDE1AP54750 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.78■■□□□ 1.72
PDE1AP54750 CCDC92B-201ENST00000575506 885 ntBASIC25.78■■□□□ 1.72
PDE1AP54750 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.78■■□□□ 1.72
PDE1AP54750 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PDE1AP54750 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
PDE1AP54750 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
PDE1AP54750 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDE1AP54750 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDE1AP54750 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDE1AP54750 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PDE1AP54750 AL049796.1-201ENST00000565336 1766 ntBASIC25.77■■□□□ 1.72
PDE1AP54750 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDE1AP54750 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.77■■□□□ 1.72
PDE1AP54750 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDE1AP54750 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PDE1AP54750 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.77■■□□□ 1.72
PDE1AP54750 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PDE1AP54750 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
PDE1AP54750 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PDE1AP54750 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.75■■□□□ 1.71
PDE1AP54750 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PDE1AP54750 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.75■■□□□ 1.71
PDE1AP54750 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.75■■□□□ 1.71
PDE1AP54750 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PDE1AP54750 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
PDE1AP54750 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDE1AP54750 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.74■■□□□ 1.71
PDE1AP54750 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDE1AP54750 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
PDE1AP54750 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
PDE1AP54750 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDE1AP54750 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.74■■□□□ 1.71
PDE1AP54750 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDE1AP54750 AC061975.6-201ENST00000579045 1553 ntBASIC25.73■■□□□ 1.71
PDE1AP54750 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.73■■□□□ 1.71
PDE1AP54750 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
PDE1AP54750 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms