Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASCL1P50553 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASCL1P50553 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ASCL1P50553 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ASCL1P50553 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
ASCL1P50553 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.7■□□□□ 0.58
ASCL1P50553 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.7■□□□□ 0.58
ASCL1P50553 TERF1P5-201ENST00000477545 1207 ntBASIC18.7■□□□□ 0.58
ASCL1P50553 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.7■□□□□ 0.58
ASCL1P50553 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.7■□□□□ 0.58
ASCL1P50553 AC120498.10-201ENST00000621827 505 ntBASIC18.7■□□□□ 0.58
ASCL1P50553 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.7■□□□□ 0.58
ASCL1P50553 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
ASCL1P50553 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.7■□□□□ 0.58
ASCL1P50553 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.7■□□□□ 0.58
ASCL1P50553 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ASCL1P50553 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.69■□□□□ 0.58
ASCL1P50553 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ASCL1P50553 AC069152.1-201ENST00000438030 544 ntBASIC18.69■□□□□ 0.58
ASCL1P50553 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.69■□□□□ 0.58
ASCL1P50553 TMEM191A-211ENST00000637163 1067 ntBASIC18.69■□□□□ 0.58
ASCL1P50553 AC133041.1-202ENST00000642053 222 ntBASIC18.69■□□□□ 0.58
ASCL1P50553 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ASCL1P50553 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ASCL1P50553 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 AC007322.4-201ENST00000509611 723 ntBASIC18.68■□□□□ 0.58
ASCL1P50553 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 AC008175.2-201ENST00000612840 297 ntBASIC18.68■□□□□ 0.58
ASCL1P50553 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ASCL1P50553 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ASCL1P50553 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
ASCL1P50553 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ASCL1P50553 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.67■□□□□ 0.58
ASCL1P50553 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ASCL1P50553 CYP2T1P-201ENST00000432607 1285 ntBASIC18.67■□□□□ 0.58
ASCL1P50553 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ASCL1P50553 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ASCL1P50553 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ASCL1P50553 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.66■□□□□ 0.58
ASCL1P50553 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.66■□□□□ 0.58
ASCL1P50553 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ASCL1P50553 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
ASCL1P50553 AC073210.2-201ENST00000430369 194 ntBASIC18.66■□□□□ 0.58
ASCL1P50553 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.66■□□□□ 0.58
ASCL1P50553 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.66■□□□□ 0.58
ASCL1P50553 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ASCL1P50553 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.66■□□□□ 0.58
ASCL1P50553 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ASCL1P50553 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.65■□□□□ 0.58
ASCL1P50553 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.65■□□□□ 0.58
ASCL1P50553 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ASCL1P50553 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms