Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.5■■□□□ 1.35
CPT1AP50416 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
CPT1AP50416 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CPT1AP50416 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CPT1AP50416 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.5■■□□□ 1.35
CPT1AP50416 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.49■■□□□ 1.35
CPT1AP50416 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CPT1AP50416 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.49■■□□□ 1.35
CPT1AP50416 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.49■■□□□ 1.35
CPT1AP50416 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.49■■□□□ 1.35
CPT1AP50416 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CPT1AP50416 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.48■■□□□ 1.35
CPT1AP50416 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.48■■□□□ 1.35
CPT1AP50416 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.48■■□□□ 1.35
CPT1AP50416 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 ESRRAP1-201ENST00000400596 1257 ntBASIC23.48■■□□□ 1.35
CPT1AP50416 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.48■■□□□ 1.35
CPT1AP50416 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.48■■□□□ 1.35
CPT1AP50416 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.48■■□□□ 1.35
CPT1AP50416 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.48■■□□□ 1.35
CPT1AP50416 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.48■■□□□ 1.35
CPT1AP50416 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CPT1AP50416 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CPT1AP50416 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.48■■□□□ 1.35
CPT1AP50416 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CPT1AP50416 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CPT1AP50416 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.47■■□□□ 1.35
CPT1AP50416 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CPT1AP50416 LSM12P1-201ENST00000411836 588 ntBASIC23.47■■□□□ 1.35
CPT1AP50416 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.47■■□□□ 1.35
CPT1AP50416 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CPT1AP50416 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CPT1AP50416 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CPT1AP50416 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CPT1AP50416 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPT1AP50416 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPT1AP50416 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CPT1AP50416 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPT1AP50416 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CPT1AP50416 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.46■■□□□ 1.35
CPT1AP50416 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CPT1AP50416 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.46■■□□□ 1.35
CPT1AP50416 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
CPT1AP50416 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.46■■□□□ 1.35
CPT1AP50416 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.35
CPT1AP50416 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CPT1AP50416 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
CPT1AP50416 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CPT1AP50416 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPT1AP50416 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPT1AP50416 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 AC245052.3-201ENST00000450182 901 ntBASIC23.45■■□□□ 1.34
CPT1AP50416 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.45■■□□□ 1.34
CPT1AP50416 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.45■■□□□ 1.34
CPT1AP50416 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.45■■□□□ 1.34
CPT1AP50416 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.45■■□□□ 1.34
CPT1AP50416 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CPT1AP50416 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.45■■□□□ 1.34
CPT1AP50416 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.45■■□□□ 1.34
CPT1AP50416 FAM21FP-204ENST00000608637 956 ntBASIC23.45■■□□□ 1.34
CPT1AP50416 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.45■■□□□ 1.34
CPT1AP50416 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPT1AP50416 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CPT1AP50416 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.45■■□□□ 1.34
CPT1AP50416 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
CPT1AP50416 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CPT1AP50416 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CPT1AP50416 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.44■■□□□ 1.34
CPT1AP50416 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.44■■□□□ 1.34
CPT1AP50416 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.44■■□□□ 1.34
CPT1AP50416 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
CPT1AP50416 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms