Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS3P49746 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.37■□□□□ 0.37
THBS3P49746 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
THBS3P49746 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.37■□□□□ 0.37
THBS3P49746 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
THBS3P49746 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
THBS3P49746 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.37■□□□□ 0.37
THBS3P49746 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.37■□□□□ 0.37
THBS3P49746 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS3P49746 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.37■□□□□ 0.37
THBS3P49746 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS3P49746 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
THBS3P49746 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
THBS3P49746 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
THBS3P49746 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 AC027682.1-201ENST00000562846 899 ntBASIC17.36■□□□□ 0.37
THBS3P49746 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
THBS3P49746 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.36■□□□□ 0.37
THBS3P49746 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
THBS3P49746 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
THBS3P49746 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS3P49746 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
THBS3P49746 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
THBS3P49746 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.36■□□□□ 0.37
THBS3P49746 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS3P49746 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.35■□□□□ 0.37
THBS3P49746 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.35■□□□□ 0.37
THBS3P49746 BX842568.3-201ENST00000418104 571 ntBASIC17.35■□□□□ 0.37
THBS3P49746 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS3P49746 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 RARRES2P6-201ENST00000567333 442 ntBASIC17.35■□□□□ 0.37
THBS3P49746 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
THBS3P49746 RASA4CP-201ENST00000424092 1398 ntBASIC17.35■□□□□ 0.37
THBS3P49746 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
THBS3P49746 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.35■□□□□ 0.37
THBS3P49746 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
THBS3P49746 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
THBS3P49746 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
THBS3P49746 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS3P49746 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
THBS3P49746 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
THBS3P49746 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.34■□□□□ 0.37
THBS3P49746 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS3P49746 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS3P49746 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.34■□□□□ 0.37
THBS3P49746 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.34■□□□□ 0.37
THBS3P49746 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
THBS3P49746 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
THBS3P49746 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS3P49746 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
THBS3P49746 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.33■□□□□ 0.37
THBS3P49746 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS3P49746 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS3P49746 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS3P49746 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS3P49746 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.33■□□□□ 0.36
THBS3P49746 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.33■□□□□ 0.36
THBS3P49746 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.33■□□□□ 0.36
THBS3P49746 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.33■□□□□ 0.36
THBS3P49746 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS3P49746 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.33■□□□□ 0.36
THBS3P49746 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
THBS3P49746 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.33■□□□□ 0.36
THBS3P49746 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS3P49746 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS3P49746 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS3P49746 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
THBS3P49746 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
THBS3P49746 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS3P49746 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
THBS3P49746 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms