Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT20P35900 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT20P35900 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT20P35900 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
KRT20P35900 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT20P35900 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
KRT20P35900 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT20P35900 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KRT20P35900 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT20P35900 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT20P35900 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KRT20P35900 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT20P35900 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT20P35900 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT20P35900 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT20P35900 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
KRT20P35900 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT20P35900 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT20P35900 AL034346.1-201ENST00000568244 1277 ntBASIC19.93■□□□□ 0.78
KRT20P35900 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
KRT20P35900 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT20P35900 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
KRT20P35900 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
KRT20P35900 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT20P35900 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT20P35900 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT20P35900 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT20P35900 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT20P35900 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT20P35900 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT20P35900 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT20P35900 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT20P35900 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT20P35900 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT20P35900 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT20P35900 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
KRT20P35900 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT20P35900 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT20P35900 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT20P35900 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
KRT20P35900 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KRT20P35900 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
KRT20P35900 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT20P35900 AL354811.1-201ENST00000610286 706 ntBASIC19.91■□□□□ 0.78
KRT20P35900 AL358852.1-201ENST00000623174 1268 ntBASIC19.91■□□□□ 0.78
KRT20P35900 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
KRT20P35900 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
KRT20P35900 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT20P35900 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT20P35900 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT20P35900 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KRT20P35900 AC244015.2-201ENST00000616358 1861 ntBASIC19.9■□□□□ 0.78
KRT20P35900 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
KRT20P35900 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT20P35900 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
KRT20P35900 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 SMUG1P1-201ENST00000590640 811 ntBASIC19.9■□□□□ 0.78
KRT20P35900 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT20P35900 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT20P35900 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT20P35900 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT20P35900 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT20P35900 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KRT20P35900 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
KRT20P35900 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KRT20P35900 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT20P35900 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms