Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HOXA6P31267 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXA6P31267 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.04■□□□□ 0.96
HOXA6P31267 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HOXA6P31267 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.04■□□□□ 0.96
HOXA6P31267 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.04■□□□□ 0.96
HOXA6P31267 RN7SL471P-201ENST00000580476 299 ntBASIC21.04■□□□□ 0.96
HOXA6P31267 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HOXA6P31267 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HOXA6P31267 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.04■□□□□ 0.96
HOXA6P31267 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HOXA6P31267 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
HOXA6P31267 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.03■□□□□ 0.96
HOXA6P31267 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.03■□□□□ 0.96
HOXA6P31267 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HOXA6P31267 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.03■□□□□ 0.96
HOXA6P31267 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.02■□□□□ 0.96
HOXA6P31267 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXA6P31267 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA6P31267 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA6P31267 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA6P31267 KRT17P3-201ENST00000420566 1262 ntBASIC21.02■□□□□ 0.96
HOXA6P31267 AC091799.1-201ENST00000422823 811 ntBASIC21.02■□□□□ 0.96
HOXA6P31267 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA6P31267 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.02■□□□□ 0.96
HOXA6P31267 AL589743.5-201ENST00000616611 1050 ntBASIC21.02■□□□□ 0.96
HOXA6P31267 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HOXA6P31267 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.02■□□□□ 0.96
HOXA6P31267 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HOXA6P31267 AC137767.1-201ENST00000602918 1920 ntBASIC21.02■□□□□ 0.95
HOXA6P31267 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HOXA6P31267 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXA6P31267 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HOXA6P31267 AL355472.2-201ENST00000422958 438 ntBASIC21.01■□□□□ 0.95
HOXA6P31267 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HOXA6P31267 CDV3P1-201ENST00000471403 739 ntBASIC21.01■□□□□ 0.95
HOXA6P31267 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXA6P31267 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.01■□□□□ 0.95
HOXA6P31267 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXA6P31267 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.01■□□□□ 0.95
HOXA6P31267 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.01■□□□□ 0.95
HOXA6P31267 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXA6P31267 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.01■□□□□ 0.95
HOXA6P31267 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HOXA6P31267 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HOXA6P31267 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 GXYLT1P3-201ENST00000453058 1193 ntBASIC21■□□□□ 0.95
HOXA6P31267 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21■□□□□ 0.95
HOXA6P31267 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 PNMA6B-201ENST00000538162 1200 ntBASIC21■□□□□ 0.95
HOXA6P31267 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21■□□□□ 0.95
HOXA6P31267 FAM197Y4-202ENST00000622692 608 ntBASIC21■□□□□ 0.95
HOXA6P31267 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXA6P31267 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21■□□□□ 0.95
HOXA6P31267 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HOXA6P31267 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HOXA6P31267 MCRIP2P1-201ENST00000394346 511 ntBASIC20.99■□□□□ 0.95
HOXA6P31267 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 C1QBPP2-201ENST00000528754 825 ntBASIC20.99■□□□□ 0.95
HOXA6P31267 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA6P31267 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXA6P31267 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXA6P31267 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXA6P31267 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA6P31267 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA6P31267 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXA6P31267 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms