Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC022517.1-201ENST00000592429 346 ntBASIC19.46■□□□□ 0.71
ABCD3P28288 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.46■□□□□ 0.71
ABCD3P28288 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.46■□□□□ 0.71
ABCD3P28288 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ABCD3P28288 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ABCD3P28288 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCD3P28288 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCD3P28288 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ABCD3P28288 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.45■□□□□ 0.7
ABCD3P28288 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.45■□□□□ 0.7
ABCD3P28288 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
ABCD3P28288 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ABCD3P28288 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCD3P28288 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 AC244015.2-201ENST00000616358 1861 ntBASIC19.44■□□□□ 0.7
ABCD3P28288 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
ABCD3P28288 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.44■□□□□ 0.7
ABCD3P28288 AC137761.2-201ENST00000561729 223 ntBASIC19.44■□□□□ 0.7
ABCD3P28288 AC145350.3-201ENST00000569033 163 ntBASIC19.44■□□□□ 0.7
ABCD3P28288 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.44■□□□□ 0.7
ABCD3P28288 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.44■□□□□ 0.7
ABCD3P28288 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
ABCD3P28288 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCD3P28288 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
ABCD3P28288 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ABCD3P28288 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ABCD3P28288 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCD3P28288 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ABCD3P28288 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.43■□□□□ 0.7
ABCD3P28288 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCD3P28288 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCD3P28288 AC008175.2-201ENST00000612840 297 ntBASIC19.43■□□□□ 0.7
ABCD3P28288 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ABCD3P28288 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.43■□□□□ 0.7
ABCD3P28288 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.43■□□□□ 0.7
ABCD3P28288 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.42■□□□□ 0.7
ABCD3P28288 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ABCD3P28288 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ABCD3P28288 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCD3P28288 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCD3P28288 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCD3P28288 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 AC016769.1-201ENST00000409132 1010 ntBASIC19.41■□□□□ 0.7
ABCD3P28288 POU5F1P4-201ENST00000413175 1085 ntBASIC19.41■□□□□ 0.7
ABCD3P28288 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCD3P28288 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCD3P28288 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCD3P28288 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCD3P28288 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCD3P28288 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms