Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 AIM19YIL087C 474 nt3.78□□□□□ -1.8
MSH1P25846 ATG27YJL178C 816 nt3.78□□□□□ -1.8
MSH1P25846 ATG10YLL042C 504 nt3.78□□□□□ -1.8
MSH1P25846 ASI2YNL159C 870 nt3.78□□□□□ -1.8
MSH1P25846 TSR4YOL022C 1227 nt3.78□□□□□ -1.8
MSH1P25846 SCD6YPR129W 1050 nt3.78□□□□□ -1.8
MSH1P25846 DPB3YBR278W 606 nt3.78□□□□□ -1.8
MSH1P25846 YCL002CYCL002C 792 nt3.78□□□□□ -1.8
MSH1P25846 RNR1YER070W 2667 nt3.78□□□□□ -1.8
MSH1P25846 RRN6YBL014C 2685 nt3.78□□□□□ -1.8
MSH1P25846 IRC3YDR332W 2070 nt3.78□□□□□ -1.8
MSH1P25846 MIT1YEL007W 2001 nt3.78□□□□□ -1.8
MSH1P25846 YEL025CYEL025C 3567 nt3.78□□□□□ -1.8
MSH1P25846 YDR248CYDR248C 582 nt3.77□□□□□ -1.81
MSH1P25846 YFR009W-AYFR009W-A 258 nt3.77□□□□□ -1.81
MSH1P25846 YLR400WYLR400W 474 nt3.77□□□□□ -1.81
MSH1P25846 RPL6BYLR448W 531 nt3.77□□□□□ -1.81
MSH1P25846 AAR2YBL074C 1068 nt3.77□□□□□ -1.81
MSH1P25846 YCL007CYCL007C 393 nt3.77□□□□□ -1.81
MSH1P25846 REF2YDR195W 1602 nt3.77□□□□□ -1.81
MSH1P25846 ARO1YDR127W 4767 nt3.76□□□□□ -1.81
MSH1P25846 MSD1YPL104W 1977 nt3.76□□□□□ -1.81
MSH1P25846 CSR2YPR030W 3366 nt3.76□□□□□ -1.81
MSH1P25846 ARG2YJL071W 1725 nt3.76□□□□□ -1.81
MSH1P25846 GLC3YEL011W 2115 nt3.76□□□□□ -1.81
MSH1P25846 NSE4YDL105W 1209 nt3.76□□□□□ -1.81
MSH1P25846 CLB3YDL155W 1284 nt3.76□□□□□ -1.81
MSH1P25846 HMO1YDR174W 741 nt3.76□□□□□ -1.81
MSH1P25846 RPL1BYGL135W 654 nt3.76□□□□□ -1.81
MSH1P25846 YLR416CYLR416C 399 nt3.76□□□□□ -1.81
MSH1P25846 VAM10YOR068C 345 nt3.76□□□□□ -1.81
MSH1P25846 YPL088WYPL088W 1029 nt3.76□□□□□ -1.81
MSH1P25846 RPL1AYPL220W 654 nt3.76□□□□□ -1.81
MSH1P25846 PHO81YGR233C 3537 nt3.76□□□□□ -1.81
MSH1P25846 MDM36YPR083W 1740 nt3.75□□□□□ -1.81
MSH1P25846 VPS33YLR396C 2076 nt3.75□□□□□ -1.81
MSH1P25846 YLR177WYLR177W 1887 nt3.75□□□□□ -1.81
MSH1P25846 YCR085WYCR085W 354 nt3.75□□□□□ -1.81
MSH1P25846 RAV2YDR202C 1056 nt3.75□□□□□ -1.81
MSH1P25846 DIG2YDR480W 972 nt3.75□□□□□ -1.81
MSH1P25846 YFL015CYFL015C 495 nt3.75□□□□□ -1.81
MSH1P25846 DAL2YIR029W 1032 nt3.75□□□□□ -1.81
MSH1P25846 YJL133C-AYJL133C-A 225 nt3.75□□□□□ -1.81
MSH1P25846 YJL147CYJL147C 1149 nt3.75□□□□□ -1.81
MSH1P25846 IME1YJR094C 1083 nt3.75□□□□□ -1.81
MSH1P25846 YLR202CYLR202C 327 nt3.75□□□□□ -1.81
MSH1P25846 YPL068CYPL068C 882 nt3.75□□□□□ -1.81
MSH1P25846 YBR063CYBR063C 1215 nt3.75□□□□□ -1.81
MSH1P25846 RRP15YPR143W 753 nt3.75□□□□□ -1.81
MSH1P25846 CHA4YLR098C 1947 nt3.75□□□□□ -1.81
MSH1P25846 HRD1YOL013C 1656 nt3.75□□□□□ -1.81
MSH1P25846 TPK3YKL166C 1197 nt3.74□□□□□ -1.81
MSH1P25846 TPO5YKL174C 1857 nt3.74□□□□□ -1.81
MSH1P25846 INO4YOL108C 456 nt3.74□□□□□ -1.81
MSH1P25846 HHF1YBR009C 312 nt3.74□□□□□ -1.81
MSH1P25846 YOR387CYOR387C 621 nt3.74□□□□□ -1.81
MSH1P25846 YBR053CYBR053C 1077 nt3.74□□□□□ -1.81
MSH1P25846 APD1YBR151W 951 nt3.74□□□□□ -1.81
MSH1P25846 DER1YBR201W 636 nt3.74□□□□□ -1.81
MSH1P25846 ZDS2YML109W 2829 nt3.74□□□□□ -1.81
MSH1P25846 DRS2YAL026C 4068 nt3.74□□□□□ -1.81
MSH1P25846 TOP1YOL006C 2310 nt3.73□□□□□ -1.81
MSH1P25846 ARG5,6YER069W 2592 nt3.73□□□□□ -1.81
MSH1P25846 SLU7YDR088C 1149 nt3.73□□□□□ -1.81
MSH1P25846 ATP6Q0085 780 nt3.73□□□□□ -1.81
MSH1P25846 YGR226CYGR226C 210 nt3.73□□□□□ -1.81
MSH1P25846 YHR180WYHR180W 492 nt3.73□□□□□ -1.81
MSH1P25846 PIR1YKL164C 1026 nt3.73□□□□□ -1.81
MSH1P25846 GTT2YLL060C 702 nt3.73□□□□□ -1.81
MSH1P25846 VMA6YLR447C 1038 nt3.73□□□□□ -1.81
MSH1P25846 YOL114CYOL114C 609 nt3.73□□□□□ -1.81
MSH1P25846 SIZ1YDR409W 2715 nt3.73□□□□□ -1.81
MSH1P25846 BEM4YPL161C 1902 nt3.73□□□□□ -1.81
MSH1P25846 YNL284C-AYNL284C-A 1323 nt3.72□□□□□ -1.81
MSH1P25846 MYO3YKL129C 3819 nt3.72□□□□□ -1.81
MSH1P25846 PWP2YCR057C 2772 nt3.72□□□□□ -1.81
MSH1P25846 CPA2YJR109C 3357 nt3.72□□□□□ -1.81
MSH1P25846 RSM18YER050C 417 nt3.72□□□□□ -1.81
MSH1P25846 YFL012W-AYFL012W-A 375 nt3.72□□□□□ -1.81
MSH1P25846 RPL30YGL030W 318 nt3.72□□□□□ -1.81
MSH1P25846 REC102YLR329W 795 nt3.72□□□□□ -1.81
MSH1P25846 TMA108YIL137C 2841 nt3.72□□□□□ -1.81
MSH1P25846 FLO9YAL063C 3969 nt3.72□□□□□ -1.81
MSH1P25846 SPA2YLL021W 4401 nt3.72□□□□□ -1.81
MSH1P25846 ATP25YMR098C 1839 nt3.72□□□□□ -1.81
MSH1P25846 KRE2YDR483W 1329 nt3.71□□□□□ -1.81
MSH1P25846 YFL002W-BYFL002W-B 1317 nt3.71□□□□□ -1.81
MSH1P25846 YGR161W-AYGR161W-A 1317 nt3.71□□□□□ -1.81
MSH1P25846 YBL100W-AYBL100W-A 1317 nt3.71□□□□□ -1.81
MSH1P25846 YCL020WYCL020W 1317 nt3.71□□□□□ -1.81
MSH1P25846 CCM1YGR150C 2595 nt3.71□□□□□ -1.81
MSH1P25846 PMT6YGR199W 2280 nt3.71□□□□□ -1.82
MSH1P25846 YCR013CYCR013C 648 nt3.71□□□□□ -1.82
MSH1P25846 YDR029WYDR029W 315 nt3.71□□□□□ -1.82
MSH1P25846 RSM28YDR494W 1086 nt3.71□□□□□ -1.82
MSH1P25846 SMT3YDR510W 306 nt3.71□□□□□ -1.82
MSH1P25846 PUG1YER185W 912 nt3.71□□□□□ -1.82
MSH1P25846 RNR2YJL026W 1200 nt3.71□□□□□ -1.82
MSH1P25846 YAL064W-BYAL064W-B 381 nt3.71□□□□□ -1.82
MSH1P25846 ATP11YNL315C 957 nt3.71□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 51.2 ms