Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.84■□□□□ 0.45
COL8A2P25067 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL8A2P25067 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL8A2P25067 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
COL8A2P25067 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COL8A2P25067 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 AC007322.1-201ENST00000426983 750 ntBASIC17.83■□□□□ 0.44
COL8A2P25067 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.83■□□□□ 0.44
COL8A2P25067 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.83■□□□□ 0.44
COL8A2P25067 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
COL8A2P25067 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL8A2P25067 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
COL8A2P25067 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.83■□□□□ 0.44
COL8A2P25067 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.83■□□□□ 0.44
COL8A2P25067 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL8A2P25067 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.82■□□□□ 0.44
COL8A2P25067 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.82■□□□□ 0.44
COL8A2P25067 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.82■□□□□ 0.44
COL8A2P25067 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COL8A2P25067 MIR663A-201ENST00000385250 93 ntBASIC17.82■□□□□ 0.44
COL8A2P25067 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.82■□□□□ 0.44
COL8A2P25067 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.82■□□□□ 0.44
COL8A2P25067 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.82■□□□□ 0.44
COL8A2P25067 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.82■□□□□ 0.44
COL8A2P25067 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
COL8A2P25067 AC008175.2-201ENST00000612840 297 ntBASIC17.82■□□□□ 0.44
COL8A2P25067 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL8A2P25067 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.81■□□□□ 0.44
COL8A2P25067 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.81■□□□□ 0.44
COL8A2P25067 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.81■□□□□ 0.44
COL8A2P25067 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.81■□□□□ 0.44
COL8A2P25067 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.81■□□□□ 0.44
COL8A2P25067 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.81■□□□□ 0.44
COL8A2P25067 AC010536.3-201ENST00000620306 533 ntBASIC17.81■□□□□ 0.44
COL8A2P25067 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.81■□□□□ 0.44
COL8A2P25067 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.81■□□□□ 0.44
COL8A2P25067 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.81■□□□□ 0.44
COL8A2P25067 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL8A2P25067 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
COL8A2P25067 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.8■□□□□ 0.44
COL8A2P25067 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 NCF1B-203ENST00000435988 1254 ntBASIC17.8■□□□□ 0.44
COL8A2P25067 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.8■□□□□ 0.44
COL8A2P25067 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.8■□□□□ 0.44
COL8A2P25067 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.8■□□□□ 0.44
COL8A2P25067 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL8A2P25067 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL8A2P25067 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL8A2P25067 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL8A2P25067 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.79■□□□□ 0.44
COL8A2P25067 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.79■□□□□ 0.44
COL8A2P25067 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.79■□□□□ 0.44
COL8A2P25067 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.79■□□□□ 0.44
COL8A2P25067 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.79■□□□□ 0.44
COL8A2P25067 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.79■□□□□ 0.44
COL8A2P25067 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.79■□□□□ 0.44
COL8A2P25067 SLC7A5P1-201ENST00000568957 537 ntBASIC17.79■□□□□ 0.44
COL8A2P25067 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.79■□□□□ 0.44
COL8A2P25067 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.79■□□□□ 0.44
COL8A2P25067 AL109923.1-201ENST00000618799 583 ntBASIC17.79■□□□□ 0.44
COL8A2P25067 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL8A2P25067 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms