Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 AC087742.1-201ENST00000575880 1738 ntBASIC26.15■■□□□ 1.78
COL11A2P13942 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL11A2P13942 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.15■■□□□ 1.78
COL11A2P13942 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.15■■□□□ 1.78
COL11A2P13942 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
COL11A2P13942 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL11A2P13942 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.14■■□□□ 1.78
COL11A2P13942 AC091799.1-201ENST00000422823 811 ntBASIC26.14■■□□□ 1.78
COL11A2P13942 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL11A2P13942 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.14■■□□□ 1.78
COL11A2P13942 CYP2T3P-201ENST00000601990 817 ntBASIC26.14■■□□□ 1.78
COL11A2P13942 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.14■■□□□ 1.78
COL11A2P13942 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL11A2P13942 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
COL11A2P13942 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL11A2P13942 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL11A2P13942 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
COL11A2P13942 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.14■■□□□ 1.77
COL11A2P13942 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL11A2P13942 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
COL11A2P13942 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL11A2P13942 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
COL11A2P13942 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL11A2P13942 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
COL11A2P13942 LSM12P1-201ENST00000411836 588 ntBASIC26.13■■□□□ 1.77
COL11A2P13942 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.13■■□□□ 1.77
COL11A2P13942 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.13■■□□□ 1.77
COL11A2P13942 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.13■■□□□ 1.77
COL11A2P13942 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.13■■□□□ 1.77
COL11A2P13942 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL11A2P13942 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL11A2P13942 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.13■■□□□ 1.77
COL11A2P13942 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL11A2P13942 UBE2SP1-201ENST00000450587 669 ntBASIC26.12■■□□□ 1.77
COL11A2P13942 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.12■■□□□ 1.77
COL11A2P13942 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL11A2P13942 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.12■■□□□ 1.77
COL11A2P13942 FAM197Y4-202ENST00000622692 608 ntBASIC26.12■■□□□ 1.77
COL11A2P13942 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
COL11A2P13942 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
COL11A2P13942 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL11A2P13942 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
COL11A2P13942 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.11■■□□□ 1.77
COL11A2P13942 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL11A2P13942 MIR4497-201ENST00000583208 89 ntBASIC26.11■■□□□ 1.77
COL11A2P13942 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.11■■□□□ 1.77
COL11A2P13942 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL11A2P13942 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL11A2P13942 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.11■■□□□ 1.77
COL11A2P13942 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.11■■□□□ 1.77
COL11A2P13942 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.11■■□□□ 1.77
COL11A2P13942 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
COL11A2P13942 C1QBPP2-201ENST00000528754 825 ntBASIC26.11■■□□□ 1.77
COL11A2P13942 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.11■■□□□ 1.77
COL11A2P13942 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
COL11A2P13942 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
COL11A2P13942 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
COL11A2P13942 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.1■■□□□ 1.77
COL11A2P13942 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.1■■□□□ 1.77
COL11A2P13942 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.1■■□□□ 1.77
COL11A2P13942 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
COL11A2P13942 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
COL11A2P13942 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.09■■□□□ 1.77
COL11A2P13942 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.09■■□□□ 1.77
COL11A2P13942 FAM21FP-204ENST00000608637 956 ntBASIC26.09■■□□□ 1.77
COL11A2P13942 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.09■■□□□ 1.77
COL11A2P13942 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.09■■□□□ 1.77
COL11A2P13942 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.09■■□□□ 1.77
COL11A2P13942 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
COL11A2P13942 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.09■■□□□ 1.77
COL11A2P13942 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.08■■□□□ 1.77
COL11A2P13942 RPPH1-201ENST00000516869 333 ntBASIC26.08■■□□□ 1.77
COL11A2P13942 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL11A2P13942 AC139530.1-201ENST00000575312 1977 ntBASIC26.08■■□□□ 1.77
COL11A2P13942 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms