Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.01■□□□□ 0.79
CCL4P13236 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.01■□□□□ 0.79
CCL4P13236 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.01■□□□□ 0.79
CCL4P13236 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.01■□□□□ 0.79
CCL4P13236 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.01■□□□□ 0.79
CCL4P13236 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20■□□□□ 0.79
CCL4P13236 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
CCL4P13236 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20■□□□□ 0.79
CCL4P13236 AC091874.3-201ENST00000512672 1195 ntBASIC20■□□□□ 0.79
CCL4P13236 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20■□□□□ 0.79
CCL4P13236 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
CCL4P13236 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20■□□□□ 0.79
CCL4P13236 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCL4P13236 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL4P13236 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 AC092053.2-201ENST00000640557 1818 ntBASIC19.99■□□□□ 0.79
CCL4P13236 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCL4P13236 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL4P13236 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 DUSP5P2-201ENST00000426873 1033 ntBASIC19.99■□□□□ 0.79
CCL4P13236 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL4P13236 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCL4P13236 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 AC093827.2-201ENST00000512654 315 ntBASIC19.99■□□□□ 0.79
CCL4P13236 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.99■□□□□ 0.79
CCL4P13236 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.99■□□□□ 0.79
CCL4P13236 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
CCL4P13236 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCL4P13236 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCL4P13236 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.98■□□□□ 0.79
CCL4P13236 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.98■□□□□ 0.79
CCL4P13236 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.98■□□□□ 0.79
CCL4P13236 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.98■□□□□ 0.79
CCL4P13236 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.98■□□□□ 0.79
CCL4P13236 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 AC026471.6-201ENST00000622954 1905 ntBASIC19.98■□□□□ 0.79
CCL4P13236 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCL4P13236 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.98■□□□□ 0.79
CCL4P13236 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.98■□□□□ 0.79
CCL4P13236 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 ESRRAP1-201ENST00000400596 1257 ntBASIC19.97■□□□□ 0.79
CCL4P13236 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CCL4P13236 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CCL4P13236 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.97■□□□□ 0.79
CCL4P13236 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 AC080038.3-201ENST00000623346 1952 ntBASIC19.97■□□□□ 0.79
CCL4P13236 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCL4P13236 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.97■□□□□ 0.79
CCL4P13236 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
CCL4P13236 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCL4P13236 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCL4P13236 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.96■□□□□ 0.79
CCL4P13236 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.96■□□□□ 0.79
CCL4P13236 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.96■□□□□ 0.79
CCL4P13236 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CCL4P13236 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.96■□□□□ 0.79
CCL4P13236 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.96■□□□□ 0.79
CCL4P13236 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCL4P13236 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.95■□□□□ 0.78
CCL4P13236 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCL4P13236 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL4P13236 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL4P13236 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCL4P13236 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCL4P13236 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCL4P13236 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms