Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 AC068587.7-201ENST00000641602 218 ntBASIC20.31■□□□□ 0.84
COX4I1P13073 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COX4I1P13073 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COX4I1P13073 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COX4I1P13073 PCDHAC2-203ENST00000615316 3011 ntBASIC20.3■□□□□ 0.84
COX4I1P13073 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
COX4I1P13073 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.3■□□□□ 0.84
COX4I1P13073 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.3■□□□□ 0.84
COX4I1P13073 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.3■□□□□ 0.84
COX4I1P13073 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.3■□□□□ 0.84
COX4I1P13073 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COX4I1P13073 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.3■□□□□ 0.84
COX4I1P13073 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COX4I1P13073 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COX4I1P13073 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.29■□□□□ 0.84
COX4I1P13073 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COX4I1P13073 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
COX4I1P13073 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COX4I1P13073 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COX4I1P13073 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.29■□□□□ 0.84
COX4I1P13073 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COX4I1P13073 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COX4I1P13073 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.29■□□□□ 0.84
COX4I1P13073 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COX4I1P13073 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COX4I1P13073 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
COX4I1P13073 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
COX4I1P13073 AC245100.8-202ENST00000629247 1058 ntBASIC20.28■□□□□ 0.84
COX4I1P13073 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.28■□□□□ 0.84
COX4I1P13073 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.28■□□□□ 0.84
COX4I1P13073 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.28■□□□□ 0.84
COX4I1P13073 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
COX4I1P13073 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.28■□□□□ 0.84
COX4I1P13073 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COX4I1P13073 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COX4I1P13073 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COX4I1P13073 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.27■□□□□ 0.84
COX4I1P13073 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 pRNA.6-201ENST00000610482 90 ntBASIC20.27■□□□□ 0.84
COX4I1P13073 pRNA.5-201ENST00000612139 90 ntBASIC20.27■□□□□ 0.84
COX4I1P13073 pRNA.11-201ENST00000618423 90 ntBASIC20.27■□□□□ 0.84
COX4I1P13073 pRNA.13-201ENST00000619112 90 ntBASIC20.27■□□□□ 0.84
COX4I1P13073 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.27■□□□□ 0.84
COX4I1P13073 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COX4I1P13073 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.27■□□□□ 0.84
COX4I1P13073 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COX4I1P13073 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COX4I1P13073 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.26■□□□□ 0.83
COX4I1P13073 AL033527.3-201ENST00000566366 1196 ntBASIC20.26■□□□□ 0.83
COX4I1P13073 AL034346.1-201ENST00000568244 1277 ntBASIC20.26■□□□□ 0.83
COX4I1P13073 AC087239.1-201ENST00000622671 572 ntBASIC20.26■□□□□ 0.83
COX4I1P13073 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COX4I1P13073 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.26■□□□□ 0.83
COX4I1P13073 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COX4I1P13073 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COX4I1P13073 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.26■□□□□ 0.83
COX4I1P13073 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms