Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.99■■□□□ 1.43
HOXC6P09630 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.99■■□□□ 1.43
HOXC6P09630 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.99■■□□□ 1.43
HOXC6P09630 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.99■■□□□ 1.43
HOXC6P09630 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.99■■□□□ 1.43
HOXC6P09630 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.99■■□□□ 1.43
HOXC6P09630 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.99■■□□□ 1.43
HOXC6P09630 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HOXC6P09630 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
HOXC6P09630 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.98■■□□□ 1.43
HOXC6P09630 AC026366.1-201ENST00000488803 879 ntBASIC23.98■■□□□ 1.43
HOXC6P09630 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.98■■□□□ 1.43
HOXC6P09630 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.98■■□□□ 1.43
HOXC6P09630 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.98■■□□□ 1.43
HOXC6P09630 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HOXC6P09630 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.98■■□□□ 1.43
HOXC6P09630 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
HOXC6P09630 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
HOXC6P09630 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
HOXC6P09630 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HOXC6P09630 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HOXC6P09630 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
HOXC6P09630 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.97■■□□□ 1.43
HOXC6P09630 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
HOXC6P09630 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
HOXC6P09630 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.97■■□□□ 1.43
HOXC6P09630 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HOXC6P09630 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
HOXC6P09630 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
HOXC6P09630 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HOXC6P09630 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
HOXC6P09630 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.96■■□□□ 1.43
HOXC6P09630 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HOXC6P09630 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.96■■□□□ 1.43
HOXC6P09630 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.96■■□□□ 1.43
HOXC6P09630 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
HOXC6P09630 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.96■■□□□ 1.43
HOXC6P09630 AC142381.4-202ENST00000563973 229 ntBASIC23.96■■□□□ 1.43
HOXC6P09630 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.96■■□□□ 1.43
HOXC6P09630 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.96■■□□□ 1.43
HOXC6P09630 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
HOXC6P09630 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.95■■□□□ 1.43
HOXC6P09630 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
HOXC6P09630 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
HOXC6P09630 AC061975.6-201ENST00000579045 1553 ntBASIC23.95■■□□□ 1.43
HOXC6P09630 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HOXC6P09630 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
HOXC6P09630 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HOXC6P09630 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.95■■□□□ 1.42
HOXC6P09630 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
HOXC6P09630 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.95■■□□□ 1.42
HOXC6P09630 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
HOXC6P09630 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.95■■□□□ 1.42
HOXC6P09630 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
HOXC6P09630 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.94■■□□□ 1.42
HOXC6P09630 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
HOXC6P09630 AL158047.1-201ENST00000445918 881 ntBASIC23.94■■□□□ 1.42
HOXC6P09630 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.94■■□□□ 1.42
HOXC6P09630 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.94■■□□□ 1.42
HOXC6P09630 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.94■■□□□ 1.42
HOXC6P09630 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
HOXC6P09630 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
HOXC6P09630 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.93■■□□□ 1.42
HOXC6P09630 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
HOXC6P09630 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.93■■□□□ 1.42
HOXC6P09630 AP003097.1-201ENST00000530657 1135 ntBASIC23.93■■□□□ 1.42
HOXC6P09630 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.93■■□□□ 1.42
HOXC6P09630 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.93■■□□□ 1.42
HOXC6P09630 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
HOXC6P09630 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
HOXC6P09630 AL596275.1-201ENST00000423464 877 ntBASIC23.92■■□□□ 1.42
HOXC6P09630 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.92■■□□□ 1.42
HOXC6P09630 RPS2P4-201ENST00000476944 856 ntBASIC23.92■■□□□ 1.42
HOXC6P09630 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 AC073648.6-201ENST00000641589 218 ntBASIC23.92■■□□□ 1.42
HOXC6P09630 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
HOXC6P09630 LSM12P1-201ENST00000411836 588 ntBASIC23.91■■□□□ 1.42
HOXC6P09630 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.91■■□□□ 1.42
HOXC6P09630 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.91■■□□□ 1.42
HOXC6P09630 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.91■■□□□ 1.42
HOXC6P09630 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.91■■□□□ 1.42
HOXC6P09630 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
HOXC6P09630 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
HOXC6P09630 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms