Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 MIR5787-201ENST00000611784 55 ntBASIC21.01■□□□□ 0.95
PRAMEF1O95521 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF1O95521 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF1O95521 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
PRAMEF1O95521 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEF1O95521 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF1O95521 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEF1O95521 AC104187.1-201ENST00000607510 612 ntBASIC21■□□□□ 0.95
PRAMEF1O95521 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEF1O95521 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEF1O95521 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PRAMEF1O95521 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF1O95521 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 KRT18P61-201ENST00000585825 1298 ntBASIC20.99■□□□□ 0.95
PRAMEF1O95521 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF1O95521 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PRAMEF1O95521 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 NTF6G-201ENST00000591094 616 ntBASIC20.98■□□□□ 0.95
PRAMEF1O95521 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF1O95521 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF1O95521 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF1O95521 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF1O95521 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.97■□□□□ 0.95
PRAMEF1O95521 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF1O95521 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF1O95521 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRAMEF1O95521 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF1O95521 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.96■□□□□ 0.95
PRAMEF1O95521 AC138907.5-202ENST00000569484 235 ntBASIC20.96■□□□□ 0.95
PRAMEF1O95521 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.96■□□□□ 0.95
PRAMEF1O95521 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF1O95521 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF1O95521 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF1O95521 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PRAMEF1O95521 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms