Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX4O95219 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SNX4O95219 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX4O95219 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX4O95219 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
SNX4O95219 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX4O95219 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX4O95219 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX4O95219 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 KRT18P14-201ENST00000534205 1250 ntBASIC19.7■□□□□ 0.74
SNX4O95219 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX4O95219 AL034346.1-201ENST00000568244 1277 ntBASIC19.7■□□□□ 0.74
SNX4O95219 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX4O95219 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX4O95219 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX4O95219 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SNX4O95219 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX4O95219 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX4O95219 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX4O95219 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX4O95219 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX4O95219 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX4O95219 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX4O95219 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX4O95219 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.69■□□□□ 0.74
SNX4O95219 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SNX4O95219 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX4O95219 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNX4O95219 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX4O95219 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L2-201ENST00000561772 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX4O95219 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L6-201ENST00000626483 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L1-201ENST00000627662 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L8-201ENST00000629013 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L3-201ENST00000630187 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L7-201ENST00000630678 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DUX4L5-201ENST00000630834 1275 ntBASIC19.68■□□□□ 0.74
SNX4O95219 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX4O95219 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX4O95219 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX4O95219 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 AL162430.1-201ENST00000480705 870 ntBASIC19.67■□□□□ 0.74
SNX4O95219 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX4O95219 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX4O95219 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNX4O95219 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX4O95219 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX4O95219 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.66■□□□□ 0.74
SNX4O95219 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX4O95219 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX4O95219 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX4O95219 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX4O95219 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX4O95219 AP004607.7-201ENST00000527152 1677 ntBASIC19.65■□□□□ 0.74
SNX4O95219 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms