Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 AC010542.4-201ENST00000563151 1910 ntBASIC33.16■■■□□ 2.9
PCF11O94913 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
PCF11O94913 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 POU5F1P3-201ENST00000428824 1078 ntBASIC33.16■■■□□ 2.9
PCF11O94913 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC33.16■■■□□ 2.9
PCF11O94913 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC33.16■■■□□ 2.9
PCF11O94913 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC33.16■■■□□ 2.9
PCF11O94913 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC33.16■■■□□ 2.9
PCF11O94913 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
PCF11O94913 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
PCF11O94913 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PCF11O94913 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC33.15■■■□□ 2.9
PCF11O94913 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC33.15■■■□□ 2.9
PCF11O94913 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33.15■■■□□ 2.9
PCF11O94913 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC33.15■■■□□ 2.9
PCF11O94913 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
PCF11O94913 TBCB-214ENST00000629269 413 ntTSL 5 BASIC33.15■■■□□ 2.9
PCF11O94913 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC33.15■■■□□ 2.9
PCF11O94913 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC33.15■■■□□ 2.9
PCF11O94913 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PCF11O94913 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PCF11O94913 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC33.14■■■□□ 2.9
PCF11O94913 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC33.14■■■□□ 2.9
PCF11O94913 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
PCF11O94913 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
PCF11O94913 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PCF11O94913 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC33.14■■■□□ 2.9
PCF11O94913 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC33.14■■■□□ 2.89
PCF11O94913 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 PRORSD1P-201ENST00000295112 541 ntBASIC33.13■■■□□ 2.89
PCF11O94913 BX276092.2-201ENST00000417668 665 ntBASIC33.13■■■□□ 2.89
PCF11O94913 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC33.13■■■□□ 2.89
PCF11O94913 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC33.13■■■□□ 2.89
PCF11O94913 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 AC068473.5-201ENST00000616428 2072 ntBASIC33.13■■■□□ 2.89
PCF11O94913 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC33.13■■■□□ 2.89
PCF11O94913 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC33.13■■■□□ 2.89
PCF11O94913 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 AC010980.2-201ENST00000587099 1412 ntBASIC33.13■■■□□ 2.89
PCF11O94913 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33.13■■■□□ 2.89
PCF11O94913 RARRES2P4-201ENST00000514074 484 ntBASIC33.13■■■□□ 2.89
PCF11O94913 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
PCF11O94913 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC33.13■■■□□ 2.89
PCF11O94913 C11orf96-202ENST00000528572 1834 ntBASIC33.12■■■□□ 2.89
PCF11O94913 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
PCF11O94913 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
PCF11O94913 AL512625.2-201ENST00000417533 625 ntBASIC33.12■■■□□ 2.89
PCF11O94913 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC33.12■■■□□ 2.89
PCF11O94913 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
PCF11O94913 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
PCF11O94913 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC33.11■■■□□ 2.89
PCF11O94913 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
PCF11O94913 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC33.11■■■□□ 2.89
PCF11O94913 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
PCF11O94913 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC33.11■■■□□ 2.89
PCF11O94913 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC33.1■■■□□ 2.89
PCF11O94913 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
PCF11O94913 MIR4758-201ENST00000577688 71 ntBASIC33.1■■■□□ 2.89
PCF11O94913 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
PCF11O94913 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
PCF11O94913 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
PCF11O94913 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
PCF11O94913 AC091799.1-201ENST00000422823 811 ntBASIC33.09■■■□□ 2.89
PCF11O94913 DUSP5P2-201ENST00000426873 1033 ntBASIC33.09■■■□□ 2.89
PCF11O94913 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC33.09■■■□□ 2.89
PCF11O94913 AC098590.1-201ENST00000468126 897 ntBASIC33.09■■■□□ 2.89
PCF11O94913 RNA5SP413-201ENST00000516373 109 ntBASIC33.09■■■□□ 2.89
PCF11O94913 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
PCF11O94913 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC33.09■■■□□ 2.89
PCF11O94913 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC33.09■■■□□ 2.89
PCF11O94913 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
PCF11O94913 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
PCF11O94913 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC33.09■■■□□ 2.89
PCF11O94913 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
PCF11O94913 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
PCF11O94913 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC33.08■■■□□ 2.89
PCF11O94913 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC33.08■■■□□ 2.89
PCF11O94913 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
PCF11O94913 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
PCF11O94913 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
PCF11O94913 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC33.08■■■□□ 2.89
PCF11O94913 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC33.08■■■□□ 2.89
PCF11O94913 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC33.07■■■□□ 2.89
PCF11O94913 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
PCF11O94913 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC33.07■■■□□ 2.88
PCF11O94913 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
PCF11O94913 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms