Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF254O75437 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF254O75437 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF254O75437 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF254O75437 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF254O75437 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF254O75437 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF254O75437 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF254O75437 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF254O75437 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF254O75437 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
ZNF254O75437 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF254O75437 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF254O75437 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF254O75437 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF254O75437 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF254O75437 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
ZNF254O75437 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
ZNF254O75437 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF254O75437 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF254O75437 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF254O75437 AL157384.1-201ENST00000445995 2473 ntBASIC18.62■□□□□ 0.57
ZNF254O75437 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF254O75437 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF254O75437 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF254O75437 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZNF254O75437 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 AP006587.3-201ENST00000525742 1516 ntBASIC18.61■□□□□ 0.57
ZNF254O75437 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF254O75437 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZNF254O75437 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF254O75437 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF254O75437 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF254O75437 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF254O75437 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF254O75437 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF254O75437 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF254O75437 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF254O75437 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF254O75437 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF254O75437 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF254O75437 BX842568.3-201ENST00000418104 571 ntBASIC18.6■□□□□ 0.57
ZNF254O75437 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF254O75437 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF254O75437 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF254O75437 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF254O75437 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF254O75437 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF254O75437 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ZNF254O75437 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.59■□□□□ 0.57
ZNF254O75437 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF254O75437 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF254O75437 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF254O75437 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF254O75437 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF254O75437 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF254O75437 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF254O75437 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF254O75437 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF254O75437 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF254O75437 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF254O75437 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF254O75437 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF254O75437 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF254O75437 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms