Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CNOT3O75175 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.35■□□□□ 0.85
CNOT3O75175 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNOT3O75175 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNOT3O75175 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CNOT3O75175 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT3O75175 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT3O75175 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CNOT3O75175 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.34■□□□□ 0.85
CNOT3O75175 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.34■□□□□ 0.85
CNOT3O75175 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CNOT3O75175 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CNOT3O75175 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.34■□□□□ 0.85
CNOT3O75175 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNOT3O75175 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.85
CNOT3O75175 AC079089.2-201ENST00000531211 1277 ntBASIC20.33■□□□□ 0.85
CNOT3O75175 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.33■□□□□ 0.85
CNOT3O75175 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CNOT3O75175 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.33■□□□□ 0.85
CNOT3O75175 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNOT3O75175 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.33■□□□□ 0.85
CNOT3O75175 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT3O75175 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNOT3O75175 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNOT3O75175 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 AC005224.4-201ENST00000583262 1652 ntBASIC20.32■□□□□ 0.84
CNOT3O75175 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT3O75175 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.32■□□□□ 0.84
CNOT3O75175 AC006015.1-201ENST00000429970 570 ntBASIC20.32■□□□□ 0.84
CNOT3O75175 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.32■□□□□ 0.84
CNOT3O75175 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.32■□□□□ 0.84
CNOT3O75175 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CNOT3O75175 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNOT3O75175 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CNOT3O75175 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.31■□□□□ 0.84
CNOT3O75175 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.31■□□□□ 0.84
CNOT3O75175 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.31■□□□□ 0.84
CNOT3O75175 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.31■□□□□ 0.84
CNOT3O75175 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CNOT3O75175 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.31■□□□□ 0.84
CNOT3O75175 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNOT3O75175 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.3■□□□□ 0.84
CNOT3O75175 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.3■□□□□ 0.84
CNOT3O75175 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT3O75175 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CNOT3O75175 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNOT3O75175 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT3O75175 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.3■□□□□ 0.84
CNOT3O75175 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT3O75175 AC079140.4-201ENST00000507448 529 ntBASIC20.3■□□□□ 0.84
CNOT3O75175 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.3■□□□□ 0.84
CNOT3O75175 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT3O75175 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNOT3O75175 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CNOT3O75175 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CNOT3O75175 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms