Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC29.32■■■□□ 2.28
BRD4O60885 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BRD4O60885 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
BRD4O60885 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC29.31■■■□□ 2.28
BRD4O60885 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
BRD4O60885 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
BRD4O60885 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
BRD4O60885 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
BRD4O60885 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
BRD4O60885 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
BRD4O60885 OR7E47P-201ENST00000546390 1422 ntBASIC29.3■■■□□ 2.28
BRD4O60885 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
BRD4O60885 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
BRD4O60885 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
BRD4O60885 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC29.3■■■□□ 2.28
BRD4O60885 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
BRD4O60885 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
BRD4O60885 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
BRD4O60885 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
BRD4O60885 AP006587.3-201ENST00000525742 1516 ntBASIC29.3■■■□□ 2.28
BRD4O60885 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
BRD4O60885 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC29.3■■■□□ 2.28
BRD4O60885 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC29.3■■■□□ 2.28
BRD4O60885 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
BRD4O60885 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC29.29■■■□□ 2.28
BRD4O60885 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
BRD4O60885 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC29.29■■■□□ 2.28
BRD4O60885 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
BRD4O60885 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
BRD4O60885 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.29■■■□□ 2.28
BRD4O60885 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC29.28■■■□□ 2.28
BRD4O60885 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC29.28■■■□□ 2.28
BRD4O60885 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC29.28■■■□□ 2.28
BRD4O60885 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
BRD4O60885 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC29.27■■■□□ 2.28
BRD4O60885 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.27■■■□□ 2.28
BRD4O60885 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.27■■■□□ 2.28
BRD4O60885 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC29.27■■■□□ 2.28
BRD4O60885 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
BRD4O60885 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
BRD4O60885 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
BRD4O60885 TSPY20P-201ENST00000450910 630 ntBASIC29.26■■■□□ 2.28
BRD4O60885 TERF1P5-201ENST00000477545 1207 ntBASIC29.26■■■□□ 2.28
BRD4O60885 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC29.26■■■□□ 2.28
BRD4O60885 AC105036.2-201ENST00000569468 176 ntBASIC29.26■■■□□ 2.28
BRD4O60885 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC29.26■■■□□ 2.28
BRD4O60885 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC29.26■■■□□ 2.28
BRD4O60885 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
BRD4O60885 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
BRD4O60885 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC29.26■■■□□ 2.27
BRD4O60885 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC29.26■■■□□ 2.27
BRD4O60885 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC29.26■■■□□ 2.27
BRD4O60885 CYP2T1P-201ENST00000432607 1285 ntBASIC29.26■■■□□ 2.27
BRD4O60885 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.26■■■□□ 2.27
BRD4O60885 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
BRD4O60885 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.26■■■□□ 2.27
BRD4O60885 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
BRD4O60885 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
BRD4O60885 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
BRD4O60885 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC29.25■■■□□ 2.27
BRD4O60885 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.25■■■□□ 2.27
BRD4O60885 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
BRD4O60885 MARS-234ENST00000630571 216 ntTSL 5 BASIC29.25■■■□□ 2.27
BRD4O60885 MARS-235ENST00000630803 183 ntTSL 3 BASIC29.25■■■□□ 2.27
BRD4O60885 AC068338.2-201ENST00000563278 1430 ntBASIC29.25■■■□□ 2.27
BRD4O60885 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
BRD4O60885 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC29.24■■■□□ 2.27
BRD4O60885 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC29.24■■■□□ 2.27
BRD4O60885 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC29.24■■■□□ 2.27
BRD4O60885 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC29.24■■■□□ 2.27
BRD4O60885 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC29.24■■■□□ 2.27
BRD4O60885 NAA20-201ENST00000310450 920 ntTSL 2 BASIC29.24■■■□□ 2.27
BRD4O60885 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
BRD4O60885 BET1L-204ENST00000410108 637 ntTSL 3 BASIC29.24■■■□□ 2.27
BRD4O60885 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC29.24■■■□□ 2.27
BRD4O60885 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC29.24■■■□□ 2.27
BRD4O60885 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
BRD4O60885 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms